RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PLRG1O43660 514 aaKnown RBP17.12■□□□□ 0.33
USB1-211ENST00000565662 CNTN5O94779 1100 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 MAOBP27338 520 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 L1CAMP32004 1257 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 SERPINH1P50454 418 aaKnown RBP17.12■□□□□ 0.33
USB1-211ENST00000565662 SETMARQ53H47 684 aaPredicted RBP17.12■□□□□ 0.33
USB1-211ENST00000565662 C2CD6Q53TS8 623 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 MANEALQ5VSG8 457 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 SFMBT2Q5VUG0 894 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 C22orf39Q6P5X5 142 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 Q6ZVU0 165 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 TFAP2DQ7Z6R9 452 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 NAXDQ8IW45 347 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 MCOLN2Q8IZK6 566 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 DEFB124Q8NES8 71 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 PIP4K2CQ8TBX8 421 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 FNIP1Q8TF40 1166 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 ADAM33Q9BZ11 813 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 GAREM1Q9H706 876 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 MRPL47Q9HD33 250 aaKnown RBP17.12■□□□□ 0.33
USB1-211ENST00000565662 TM7SF3Q9NS93 570 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 PPM1HQ9ULR3 514 aa17.12■□□□□ 0.33
USB1-211ENST00000565662 CHD5Q8TDI0 1954 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 A0A1W2PQJ5 194 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 LATO43561 262 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 RAMP2O60895 175 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 RFC1P35251 1148 aaPredicted RBP17.11■□□□□ 0.33
USB1-211ENST00000565662 GGCXP38435 758 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 HDAC4P56524 1084 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 YBEYP58557 167 aaPredicted RBP17.11■□□□□ 0.33
USB1-211ENST00000565662 POLD3Q15054 466 aaPredicted RBP17.11■□□□□ 0.33
USB1-211ENST00000565662 NAPEPLDQ6IQ20 393 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 TRNP1Q6NT89 227 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 RWDD4Q6NW29 188 aaKnown RBP17.11■□□□□ 0.33
USB1-211ENST00000565662 WDR59Q6PJI9 974 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 GLRX5Q86SX6 157 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 PSTKQ8IV42 348 aaKnown RBP17.11■□□□□ 0.33
USB1-211ENST00000565662 AADATQ8N5Z0 425 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 ARHGEF26Q96DR7 871 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 MCEEQ96PE7 176 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 PCDHB18PQ96TA0 734 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 MPP6Q9NZW5 540 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 APOBEC2Q9Y235 224 aaKnown RBP17.11■□□□□ 0.33
USB1-211ENST00000565662 ANKRD6Q9Y2G4 727 aa17.11■□□□□ 0.33
USB1-211ENST00000565662 SPTBN2O15020 2390 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 TBC1D3DA0A087WVF3 549 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 TBC1D3IA0A087WXS9 549 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 TBC1D3EA0A087X179 549 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 TBC1D3KA0A087X1G2 549 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 TMEM8BA6NDV4 472 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 TBC1D3FA6NER0 549 aaPredicted RBP17.1■□□□□ 0.33
USB1-211ENST00000565662 FAM47DPA6NHR8 397 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 LRRC53A6NM62 1247 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 TBC1D3LB9A6J9 549 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 CBX4O00257 560 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 PCDHGA12O60330 932 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 RNF8O76064 485 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 IGHV4-34P06331 123 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 PLEKP08567 350 aaPredicted RBP17.1■□□□□ 0.33
USB1-211ENST00000565662 TBC1D3HP0C7X1 549 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 CD59P13987 128 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 CD38P28907 300 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 CHRNA3P32297 505 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 DRD3P35462 400 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 GRK6P43250 576 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 ARRB1P49407 418 aaPredicted RBP17.1■□□□□ 0.33
USB1-211ENST00000565662 KLHL30Q0D2K2 578 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 ACAP1Q15027 740 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 C15orf59Q2T9L4 293 aaPredicted RBP17.1■□□□□ 0.33
USB1-211ENST00000565662 HLA-BQ31612 363 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 PARP15Q460N3 678 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 TBC1D3GQ6DHY5 549 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 TBC1D3CQ6IPX1 549 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 IRF2BP2Q7Z5L9 587 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 TBC1D3Q8IZP1 549 aaPredicted RBP17.1■□□□□ 0.33
USB1-211ENST00000565662 BAP1Q92560 729 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 SYN2Q92777 582 aaPredicted RBP17.1■□□□□ 0.33
USB1-211ENST00000565662 PSMB7Q99436 277 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 FUCA2Q9BTY2 467 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 OSBPL1AQ9BXW6 950 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 ANLNQ9NQW6 1124 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 GDF3Q9NR23 364 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 ZNF212Q9UDV6 495 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 IL36AQ9UHA7 158 aa17.1■□□□□ 0.33
USB1-211ENST00000565662 NUMA1Q14980 2115 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 A0A1B0GVT2 93 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 C10orf142B7Z368 130 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 I6L893 689 aaPredicted RBP17.09■□□□□ 0.33
USB1-211ENST00000565662 LRIG2O94898 1065 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 IRAK1P51617 712 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 SNRPD1P62314 119 aaKnown RBP17.09■□□□□ 0.33
USB1-211ENST00000565662 SIM1P81133 766 aaPredicted RBP17.09■□□□□ 0.33
USB1-211ENST00000565662 RAD51Q06609 339 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 GRM3Q14832 879 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 IQCB1Q15051 598 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 PPP1R15BQ5SWA1 713 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 NLRP14Q86W24 1093 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 OR52K2Q8NGK3 314 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 OR2A12Q8NGT7 310 aa17.09■□□□□ 0.33
USB1-211ENST00000565662 JOSD2Q8TAC2 188 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms