RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 STON1Q9Y6Q2 735 aa12.74□□□□□ -0.37
KARS-204ENST00000564578 MUC22E2RYF6 1773 aaPredicted RBP12.74□□□□□ -0.37
KARS-204ENST00000564578 NYNRINQ9P2P1 1898 aaKnown RBP12.73□□□□□ -0.37
KARS-204ENST00000564578 CXorf51AA0A1B0GTR3 108 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 A0A1W2PQF6 199 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 TCRBV7S2A1N4TA0A589 114 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 ARHGAP42A6NI28 874 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 DLL1O00548 723 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 KCNK3O14649 394 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 PRAMEF11O60813 436 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 ZNF821O75541 412 aaPredicted RBP12.73□□□□□ -0.37
KARS-204ENST00000564578 KLF8O95600 359 aaPredicted RBP12.73□□□□□ -0.37
KARS-204ENST00000564578 PEX11BO96011 259 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 SRPRAP08240 638 aaKnown RBP12.73□□□□□ -0.37
KARS-204ENST00000564578 SRCP12931 536 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 PRKCHP24723 683 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 NTSR1P30989 418 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 GNG11P61952 73 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 TFDP2Q14188 446 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 SH2D3CQ8N5H7 860 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 KDM1BQ8NB78 822 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 CCDC26Q8TAB7 109 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.73□□□□□ -0.37
KARS-204ENST00000564578 LRRN4Q8WUT4 740 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 OLFM3Q96PB7 478 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 MTG2Q9H4K7 406 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 IPO11Q9UI26 975 aaKnown RBP12.73□□□□□ -0.37
KARS-204ENST00000564578 MMP17Q9ULZ9 603 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 HEY1Q9Y5J3 304 aa12.73□□□□□ -0.37
KARS-204ENST00000564578 TTC34A8MYJ7 566 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 PRR33A8MZF0 331 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 NPC1O15118 1278 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 ATP9BO43861 1147 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 HLA-EP13747 358 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 VAV1P15498 845 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 ZFXP17010 805 aaPredicted RBP12.72□□□□□ -0.37
KARS-204ENST00000564578 AVPR2P30518 371 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 GARSP41250 739 aaKnown RBP12.72□□□□□ -0.37
KARS-204ENST00000564578 HSF5Q4G112 596 aaPredicted RBP12.72□□□□□ -0.37
KARS-204ENST00000564578 KIAA1211LQ6NV74 962 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 SERPINA13PQ6UXR4 307 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 SYT13Q7L8C5 426 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 SPEM1Q8N4L4 309 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 ZNF419Q96HQ0 510 aaPredicted RBP12.72□□□□□ -0.37
KARS-204ENST00000564578 HPCAL4Q9UM19 191 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 ZNF318Q5VUA4 2279 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 SERPINH1P50454 418 aaKnown RBP12.72□□□□□ -0.37
KARS-204ENST00000564578 SLC20A2Q08357 652 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 DLG2Q15700 870 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 CRY1Q16526 586 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 FNDC3BQ53EP0 1204 aaKnown RBP12.72□□□□□ -0.37
KARS-204ENST00000564578 RETSATQ6NUM9 610 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 NYAP1Q6ZVC0 841 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 ZNF354CQ86Y25 554 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 ATP11CQ8NB49 1132 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 PTPRN2Q92932 1015 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 TSGA13Q96PP4 275 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 LGMNQ99538 433 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 RAD54BQ9Y620 910 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 MYO15AQ9UKN7 3530 aa12.72□□□□□ -0.37
KARS-204ENST00000564578 APOC4-APOC2K7ER74 178 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 TJP3O95049 919 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 APOC2P02655 101 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 COL9A1P20849 921 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 TGM2P21980 687 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 MSNP26038 577 aaKnown RBP12.71□□□□□ -0.37
KARS-204ENST00000564578 MAGEA9P43362 315 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 NR2C2P49116 596 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 IL10RBQ08334 325 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 HNRNPA1L2Q32P51 320 aaKnown RBP12.71□□□□□ -0.37
KARS-204ENST00000564578 INO80DQ53TQ3 878 aaPredicted RBP12.71□□□□□ -0.37
KARS-204ENST00000564578 C9orf64Q5T6V5 341 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 B4GALNT4Q76KP1 1039 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 TRMT11Q7Z4G4 463 aaKnown RBP12.71□□□□□ -0.37
KARS-204ENST00000564578 LRRC49Q8IUZ0 686 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 CNPY4Q8N129 248 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 P3H4Q92791 437 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 VOPP1Q96AW1 172 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 HAUS1Q96CS2 278 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 HDAC11Q96DB2 347 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 ERLEC1Q96DZ1 483 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 SLC25A13Q9UJS0 675 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 FCF1Q9Y324 198 aaKnown RBP12.71□□□□□ -0.37
KARS-204ENST00000564578 DMDP11532 3685 aa12.71□□□□□ -0.37
KARS-204ENST00000564578 ZSCAN5CA6NGD5 496 aaPredicted RBP12.7□□□□□ -0.38
KARS-204ENST00000564578 ATG13O75143 517 aa12.7□□□□□ -0.38
KARS-204ENST00000564578 EPHX1P07099 455 aa12.7□□□□□ -0.38
KARS-204ENST00000564578 HOXB2P14652 356 aa12.7□□□□□ -0.38
KARS-204ENST00000564578 CLCN6P51797 869 aa12.7□□□□□ -0.38
KARS-204ENST00000564578 ST8SIA6P61647 398 aa12.7□□□□□ -0.38
KARS-204ENST00000564578 ETF1P62495 437 aaKnown RBP12.7□□□□□ -0.38
KARS-204ENST00000564578 SATB1Q01826 763 aa12.7□□□□□ -0.38
KARS-204ENST00000564578 SLC10A7Q0GE19 358 aa12.7□□□□□ -0.38
KARS-204ENST00000564578 CAMK2GQ13555 558 aaPredicted RBP12.7□□□□□ -0.38
KARS-204ENST00000564578 CYTH1Q15438 398 aa12.7□□□□□ -0.38
KARS-204ENST00000564578 TMEM31Q5JXX7 168 aa12.7□□□□□ -0.38
KARS-204ENST00000564578 FAM182AQ5T1J6 154 aa12.7□□□□□ -0.38
KARS-204ENST00000564578 SLC13A5Q86YT5 568 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms