RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 Q0VFX4 171 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 EIF2B5Q13144 721 aaKnown RBP11□□□□□ -0.65
HDGFL3-204ENST00000563790 ZNF284Q2VY69 593 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 AGBL4Q5VU57 503 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 DUS1LQ6P1R4 473 aaKnown RBP11□□□□□ -0.65
HDGFL3-204ENST00000563790 XKRXQ6PP77 449 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 KYAT3Q6YP21 454 aaKnown RBP11□□□□□ -0.65
HDGFL3-204ENST00000563790 PIM3Q86V86 326 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 CPXM2Q8N436 756 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 AGBL5Q8NDL9 886 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 SCAMP5Q8TAC9 235 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 DDI1Q8WTU0 396 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 KLK6Q92876 244 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 BMFQ96LC9 184 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 TWSG1Q9GZX9 223 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 TCEAL2Q9H3H9 227 aaPredicted RBP11□□□□□ -0.65
HDGFL3-204ENST00000563790 ABCB8Q9NUT2 735 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 SIRPGQ9P1W8 387 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 GGA2Q9UJY4 613 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 CDH9Q9ULB4 789 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 HS3ST3A1Q9Y663 406 aa11□□□□□ -0.65
HDGFL3-204ENST00000563790 POM121BA6NF01 834 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 ZBTB43O43298 467 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 IL1BP01584 269 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 SPATA31C1P0DKV0 1188 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 PABPC1P11940 636 aaKnown RBP10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 DLSTP36957 453 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 THOP1P52888 689 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 METAP1P53582 386 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 GNL2Q13823 731 aaKnown RBP10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 MAP7Q14244 749 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 PDLIM3Q53GG5 364 aaPredicted RBP10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 LVRNQ6Q4G3 990 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 ESX1Q8N693 406 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 WFDC11Q8NEX6 87 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 MTFMTQ96DP5 389 aaKnown RBP10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 LRRC2Q9BYS8 371 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 RDH14Q9HBH5 336 aa10.99□□□□□ -0.65
HDGFL3-204ENST00000563790 IGHV5-10-1A0A0J9YXX1 117 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 A0A1W2PQU0 124 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 ARHGEF35A5YM69 484 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 SPINT1O43278 529 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 STK17BO94768 372 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 DLGAP3O95886 979 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 GLB1P16278 677 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 TSHRP16473 764 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 POLR2EP19388 210 aaKnown RBP10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 MATR3P43243 847 aaKnown RBP eCLIP10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 PLA2G4AP47712 749 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 TAS2R38P59533 333 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 ST8SIA6P61647 398 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 CSNK1G2P78368 415 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 CHAF1BQ13112 559 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 TRA2AQ13595 282 aaKnown RBP eCLIP10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 B4GALNT3Q6L9W6 998 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 NEK5Q6P3R8 708 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 MTFR2Q6P444 385 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 ZNF765Q7L2R6 523 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 TOP6BLQ8N6T0 577 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 BMPERQ8N8U9 685 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 KDM1BQ8NB78 822 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 PCDH19Q8TAB3 1148 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 MYCBPAPQ8TBZ2 947 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 SCG3Q8WXD2 468 aaKnown RBP10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 TMEM121Q9BTD3 319 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 ING2Q9H160 280 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 ACSS2Q9NR19 701 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 VPS54Q9P1Q0 977 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 TMEM63CQ9P1W3 806 aa10.98□□□□□ -0.65
HDGFL3-204ENST00000563790 SEC16AO15027 2179 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 EDDM13A0A1B0GTR0 161 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 PIPSLA2A3N6 862 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 GOLGA8AA7E2F4 631 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 GOLGA8BA8MQT2 603 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 OGTO15294 1046 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 PHACTR2O75167 634 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 CREG1O75629 220 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 LMO2P25791 158 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 RBMXP38159 391 aaKnown RBP10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 STRN3Q13033 797 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 TPRG1LQ5T0D9 272 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 CERCAMQ5T4B2 595 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 KLHDC10Q6PID8 442 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 LYSMD3Q7Z3D4 306 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 HORMAD1Q86X24 394 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 NRSN1Q8IZ57 195 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 STK40Q8N2I9 435 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 CCDC74BQ96LY2 380 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 ZPBPQ9BS86 351 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 NUDT9Q9BW91 350 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 ELOVL4Q9GZR5 314 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 ASB7Q9H672 318 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 OCIAD1Q9NX40 245 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 GDAP2Q9NXN4 497 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 IPO11Q9UI26 975 aaKnown RBP10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 PCDHA4Q9UN74 947 aa10.97□□□□□ -0.65
HDGFL3-204ENST00000563790 ITIH6Q6UXX5 1313 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 MASP2O00187 686 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 BAG4O95429 457 aaKnown RBP10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 AGAP20933 346 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms