RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 RIN1Q13671 783 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 GPNMBQ14956 572 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 MEA1Q16626 185 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 SPOPLQ6IQ16 392 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 DPY19L2P1Q6NXN4 242 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 PPP1R2P3Q6NXS1 205 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 GJB7Q6PEY0 223 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 TMEM270Q6UE05 265 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 UBE2Q1Q7Z7E8 422 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 FAM71AQ8IYT1 594 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 THEM5Q8N1Q8 247 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 APPL2Q8NEU8 664 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 ZNF483Q8TF39 744 aaPredicted RBP4.88□□□□□ -1.63
CDR2-203ENST00000563573 SHC3Q92529 594 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 BADQ92934 168 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 TOP1MTQ969P6 601 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 C18orf25Q96B23 403 aaPredicted RBP4.88□□□□□ -1.63
CDR2-203ENST00000563573 CHFRQ96EP1 664 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 EIF3CQ99613 913 aaKnown RBP4.88□□□□□ -1.63
CDR2-203ENST00000563573 CHP1Q99653 195 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 AGPAT1Q99943 283 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 KRTAP17-1Q9BYP8 105 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 SNX25Q9H3E2 840 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 HAUS4Q9H6D7 363 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 CISHQ9NSE2 258 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 SEPT11Q9NVA2 429 aaKnown RBP4.88□□□□□ -1.63
CDR2-203ENST00000563573 GDAP2Q9NXN4 497 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 SIX4Q9UIU6 781 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 ZKSCAN5Q9Y2L8 839 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 SNX9Q9Y5X1 595 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.88□□□□□ -1.63
CDR2-203ENST00000563573 SCN1AP35498 2009 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 TTC3P53804 2025 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 TET1Q8NFU7 2136 aa4.88□□□□□ -1.63
CDR2-203ENST00000563573 ALPK3Q96L96 1907 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 MKI67P46013 3256 aaKnown RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 GOLGA6L9A6NEM1 432 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 CASTOR2A6NHX0 329 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 TBKBP1A7MCY6 615 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 A8MXQ7 604 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 THAP12O43422 761 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 TACC1O75410 805 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 B3GAT3O94766 335 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 NDUFA10O95299 355 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 PAEPP09466 180 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 CCDC175P0C221 793 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 VDRP11473 427 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 ODC1P11926 461 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 MAGEA1P43355 309 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 ALDH7A1P49419 539 aaKnown RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 GUCY2FP51841 1108 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 CDH8P55286 799 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 SNX16P57768 344 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 CCZ1BP86790 482 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 CCZ1P86791 482 aaPredicted RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 DGCR2P98153 550 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 ELAVL2Q12926 359 aaKnown RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 ADAM15Q13444 863 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 NAB2Q15742 525 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 SMN1Q16637 294 aaKnown RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 UPP1Q16831 310 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 GAGE13Q4V321 117 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 FNDC3BQ53EP0 1204 aaKnown RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 TM4SF20Q53R12 229 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 CCDC122Q5T0U0 273 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 PSRC1Q6PGN9 363 aaPredicted RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 WDR59Q6PJI9 974 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 SCARA5Q6ZMJ2 495 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.87□□□□□ -1.63
CDR2-203ENST00000563573 ZNF365Q70YC5 407 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 KIAA1328Q86T90 577 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 ZSCAN30Q86W11 494 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 UNC93AQ86WB7 457 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 GSPT2Q8IYD1 628 aaKnown RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 BCL6BQ8N143 479 aaPredicted RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 TMEM86AQ8N2M4 240 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 OR6B3Q8NGW1 331 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 SPATA18Q8TC71 538 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 PHOSPHO2Q8TCD6 241 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 ZNF606Q8WXB4 792 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 MIEF2Q96C03 454 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 FOXRED1Q96CU9 486 aaPredicted RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 TMEM176AQ96HP8 235 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 ABHD8Q96I13 439 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 TNIP3Q96KP6 325 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 SENP8Q96LD8 212 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 CASD1Q96PB1 797 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 PRRX2Q99811 253 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 TMEM175Q9BSA9 504 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 CXCL16Q9H2A7 254 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 APOBEC3GQ9HC16 384 aaKnown RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 TRIM39Q9HCM9 518 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 KCMF1Q9P0J7 381 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 C11orf21Q9P2W6 132 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 STK39Q9UEW8 545 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 TUBGCP4Q9UGJ1 667 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 BARX2Q9UMQ3 279 aaPredicted RBP4.87□□□□□ -1.63
CDR2-203ENST00000563573 CNTN6Q9UQ52 1028 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 CEP83Q9Y592 693 aa4.87□□□□□ -1.63
CDR2-203ENST00000563573 LTBP2Q14767 1821 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms