RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 DLC1Q96QB1 1528 aa6.35□□□□□ -1.39
CLK3-212ENST00000563418 CPS1P31327 1500 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 AVILO75366 819 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 LRP8Q14114 963 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 SKIV2LQ15477 1246 aaKnown RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 GRAMD2AQ8IUY3 354 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ATPAF2Q8N5M1 289 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ATG16L2Q8NAA4 619 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ERLEC1Q96DZ1 483 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 AMNQ9BXJ7 453 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 MTMR12Q9C0I1 747 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 RETREG1Q9H6L5 497 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 POLG2Q9UHN1 485 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 PLLPQ9Y342 182 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 MYH3P11055 1940 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ZFYVE16Q7Z3T8 1539 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 HDAC3O15379 428 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 PAPSS1O43252 624 aaPredicted RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 TRIM3O75382 744 aaPredicted RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 C6orf222P0C671 652 aaPredicted RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 RBP3P10745 1247 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 GRIA2P42262 883 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 PKNOX1P55347 436 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ARPP19P56211 112 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 FXNQ16595 210 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 INSCQ1MX18 579 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ANKRD26P1Q6NSI1 321 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 RRM2BQ7LG56 351 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 KRT78Q8N1N4 520 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 KCTD15Q96SI1 283 aaPredicted RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 PHOX2BQ99453 314 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 DHRS9Q9BPW9 319 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ERAP1Q9NZ08 941 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ALOX15BO15296 676 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 PROSCO94903 275 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 RPLP0P05388 317 aaKnown RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 MYL12AP19105 171 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 MATN1P21941 496 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 FBLN1P23142 703 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 CD79BP40259 229 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 RPL10AP62906 217 aaKnown RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 MPP7Q5T2T1 576 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 LIN54Q6MZP7 749 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 USP49Q70CQ1 688 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 SH3BP5LQ7L8J4 393 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 PRELID2Q8N945 189 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 IP6K1Q92551 441 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ZNF594Q96JF6 807 aaPredicted RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 PCDHGC3Q9UN70 934 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 AKAP8O43823 692 aaKnown RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 HMGN1P05114 100 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 BMP6P22004 513 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 CLVS2Q5SYC1 327 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 DDI2Q5TDH0 399 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 DENND5BQ6ZUT9 1274 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 FOXP4Q8IVH2 680 aaPredicted RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 SLCO2A1Q92959 643 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 FAM136AQ96C01 138 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 MRPL48Q96GC5 212 aaKnown RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 MAGEB10Q96LZ2 347 aaPredicted RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 DMRTB1Q96MA1 342 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 FRMD6Q96NE9 622 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 IL25Q9H293 177 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 OSGEPQ9NPF4 335 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 RAP2CQ9Y3L5 183 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 MROH2AA6NES4 1674 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 HECW2Q9P2P5 1572 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 RCCD1A6NED2 376 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 OR6C70A6NIJ9 312 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 PDE8BO95263 885 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 RPS17P08708 135 aaKnown RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 PRKAR1BP31321 381 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 CTSWP56202 376 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 GABARAPL2P60520 117 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 SRP54P61011 504 aaKnown RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 GTF2IP78347 998 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 PON2Q15165 354 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 KCNJ8Q15842 424 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 DENND1BQ6P3S1 775 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 SRFBP1Q8NEF9 429 aaKnown RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 KCNN3Q9UGI6 736 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 PCDHA6Q9UN73 950 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 KCNH4Q9UQ05 1017 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 SUGT1Q9Y2Z0 365 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 PCDHA8Q9Y5H6 950 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 IGSF1Q8N6C5 1336 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ANKRD34BA5PLL1 514 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 CYP26A1O43174 497 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 MAPK1P28482 360 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 MAD2L1Q13257 205 aaPredicted RBP6.34□□□□□ -1.39
CLK3-212ENST00000563418 DNASE1L3Q13609 305 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 EPHA7Q15375 998 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 ZSWIM7Q19AV6 140 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 FAXCQ5TGI0 409 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 AGAP7PQ5VUJ5 663 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 DSELQ8IZU8 1212 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 TBC1D19Q8N5T2 526 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 NYXQ9GZU5 481 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 UNC93B1Q9H1C4 597 aa6.34□□□□□ -1.39
CLK3-212ENST00000563418 SLC52A2Q9HAB3 445 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms