RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 MCF2LO15068 1137 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 ALOX15BO15296 676 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 RAD51BO15315 384 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 ATP9BO43861 1147 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 PRAMEF10O60809 474 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 GCATO75600 419 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 TRIM21P19474 475 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 ITIH1P19827 911 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 AKT2P31751 481 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 PIK3CAP42336 1068 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 SLC11A2P49281 568 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 NUMBP49757 651 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 ARSDP51689 593 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 PLK1P53350 603 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 RAD23BP54727 409 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 RIPPLY3P57055 190 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 DAOAP59103 153 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 ADIGQ0VDE8 80 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 EIF2B5Q13144 721 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 CDH18Q13634 790 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 FAM46CQ5VWP2 391 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 NUGGCQ68CJ6 796 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 SEL1L3Q68CR1 1132 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 BRAPQ7Z569 592 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 DSG4Q86SJ6 1040 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 SLC9A9Q8IVB4 645 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 UNC45BQ8IWX7 931 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 SCML4Q8N228 414 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 ANKRD52Q8NB46 1076 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 FAM174AQ8TBP5 190 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 RNF139Q8WU17 664 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 NAT6Q93015 286 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 TATDN2Q93075 761 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 ALG14Q96F25 216 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 SLC39A13Q96H72 371 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 FCRL2Q96LA5 508 aaPredicted RBP7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 KLF6Q99612 283 aaPredicted RBP7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 FOXP3Q9BZS1 431 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 EPB41L5Q9HCM4 733 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 HS3ST3A1Q9Y663 406 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 HIVEP3Q5T1R4 2406 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 ARHGEF17Q96PE2 2063 aaPredicted RBP7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 ITPR3Q14573 2671 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 A0A1W2PQ27 194 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 A0A1W2PQ64 194 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 A0A1W2PQC6 194 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 C1QTNF3-AMACRE9PGA6 284 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 IKBKBO14920 756 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 MOCS3O95396 460 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 FYNP06241 537 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 TXLNAP40222 546 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 TBX4P57082 545 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 ZFP36L1Q07352 338 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 KNOP1Q1ED39 458 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 KMT5BQ4FZB7 885 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 RNF219Q5W0B1 726 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 CXorf57Q6NSI4 855 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 BORAQ6PGQ7 559 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 PTAR1Q7Z6K3 402 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 PARGQ86W56 976 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 TICAM1Q8IUC6 712 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 RBFAQ8N0V3 343 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 PDILTQ8N807 584 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 ZSCAN1Q8NBB4 408 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 OR52K2Q8NGK3 314 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 SPATA20Q8TB22 786 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 LMX1AQ8TE12 382 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 KCTD13Q8WZ19 329 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 ERCC4Q92889 916 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 PPP1R13BQ96KQ4 1090 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 HEXIM2Q96MH2 286 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 NIF3L1Q9GZT8 377 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 CLPBQ9H078 707 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 TCEAL2Q9H3H9 227 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 SEPT10Q9P0V9 454 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 PISDQ9UG56 409 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 XPO7Q9UIA9 1087 aaKnown RBP7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 LOXL2Q9Y4K0 774 aa7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 MORC2Q9Y6X9 1032 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-206ENST00000563343 CELSR1Q9NYQ6 3014 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 TNRC6AQ8NDV7 1962 aaKnown RBP7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 LMO7DNF2Z398 122 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 H3BM21 787 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 MTSS1O43312 755 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 JUNDP17535 347 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 NNMTP40261 264 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 UQCRFS1P47985 274 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 PFN3P60673 137 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 CCL7P80098 99 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 PPP3CAQ08209 521 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 SLC12A1Q13621 1099 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 DLG2Q15700 870 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 ZNF787Q6DD87 383 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 Q6ZVU0 165 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 UNC13DQ70J99 1090 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 TAS1R2Q8TE23 839 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 USP7Q93009 1102 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 TBATAQ96M53 351 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 IL12RB2Q99665 862 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 C7orf25Q9BPX7 421 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms