RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 VPS51Q9UID3 782 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 STAP1Q9ULZ2 295 aa16.14■□□□□ 0.17
CLK3-211ENST00000563297 A0A0D9SEW6 157 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 FAM170AA1A519 330 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 SMAD6O43541 496 aaKnown RBP16.13■□□□□ 0.17
CLK3-211ENST00000563297 C1SP09871 688 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 ERCC5P28715 1186 aaPredicted RBP16.13■□□□□ 0.17
CLK3-211ENST00000563297 CHRNA3P32297 505 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 SCNN1AP37088 669 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 OVGP1Q12889 678 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 RAPGEF1Q13905 1077 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 COL28A1Q2UY09 1125 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 DPCR1Q3MIW9 517 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 LRRC31Q6UY01 552 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 SETD3Q86TU7 594 aaPredicted RBP16.13■□□□□ 0.17
CLK3-211ENST00000563297 ERICH1Q86X53 443 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 OXR1Q8N573 874 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 TMIEQ8NEW7 156 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 OR2A12Q8NGT7 310 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 HNRNPLLQ8WVV9 542 aaKnown RBP16.13■□□□□ 0.17
CLK3-211ENST00000563297 C2orf49Q9BVC5 232 aaPredicted RBP16.13■□□□□ 0.17
CLK3-211ENST00000563297 NAA15Q9BXJ9 866 aaKnown RBP16.13■□□□□ 0.17
CLK3-211ENST00000563297 CLSTN2Q9H4D0 955 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 PREBQ9HCU5 417 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 MPP6Q9NZW5 540 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 FARP1Q9Y4F1 1045 aaPredicted RBP16.13■□□□□ 0.17
CLK3-211ENST00000563297 FHOD1Q9Y613 1164 aa16.13■□□□□ 0.17
CLK3-211ENST00000563297 TRPM6Q9BX84 2022 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 ITPR1Q14643 2758 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 MYLKQ15746 1914 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 IGLV3-10A0A075B6K4 115 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 PRAMEF26H0Y7S4 382 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 RNF103O00237 685 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 MAGEC1O60732 1142 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 RNGTTO60942 597 aaKnown RBP16.12■□□□□ 0.17
CLK3-211ENST00000563297 RRM1P23921 792 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 FLT3P36888 993 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 CLDN6P56747 220 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 SETMARQ53H47 684 aaPredicted RBP16.12■□□□□ 0.17
CLK3-211ENST00000563297 C2CD6Q53TS8 623 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 FAM102AQ5T9C2 384 aaPredicted RBP16.12■□□□□ 0.17
CLK3-211ENST00000563297 PIP5KL1Q5T9C9 394 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 SFMBT2Q5VUG0 894 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 TAF3Q5VWG9 929 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 TRNP1Q6NT89 227 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 ARRDC3Q96B67 414 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 SAMSN1Q9NSI8 373 aaKnown RBP16.12■□□□□ 0.17
CLK3-211ENST00000563297 TMEM51Q9NW97 253 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 TMEM59LQ9UK28 342 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 CA5BQ9Y2D0 317 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 PAXBP1Q9Y5B6 917 aa16.12■□□□□ 0.17
CLK3-211ENST00000563297 E9PAM4 449 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 SLC31A1O15431 190 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 RFPL3O75679 317 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 CDK4P11802 303 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 JUPP14923 745 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 UCHL3P15374 230 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 GLDCP23378 1020 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 OR1E1P30953 314 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 ACADVLP49748 655 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 ACBD5Q5T8D3 534 aaPredicted RBP16.11■□□□□ 0.17
CLK3-211ENST00000563297 NEK5Q6P3R8 708 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 LINGO4Q6UY18 593 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 BNIPLQ7Z465 357 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 TFAP2DQ7Z6R9 452 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 NOP9Q86U38 636 aaKnown RBP16.11■□□□□ 0.17
CLK3-211ENST00000563297 DCAF4L2Q8NA75 395 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 CHST14Q8NCH0 376 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 OR7D4Q8NG98 312 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 KLK6Q92876 244 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 KLHDC7BQ96G42 594 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 HAPLN3Q96S86 360 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 STK33Q9BYT3 514 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 CHMP5Q9NZZ3 219 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 ZNF212Q9UDV6 495 aa16.11■□□□□ 0.17
CLK3-211ENST00000563297 FASNP49327 2511 aaKnown RBP16.1■□□□□ 0.17
CLK3-211ENST00000563297 A0A1W2PQU0 124 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 ILVBLA1L0T0 632 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 GOLGA8SH3BPF8 625 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 KPNA3O00505 521 aaPredicted RBP16.1■□□□□ 0.17
CLK3-211ENST00000563297 PES1O00541 588 aaKnown RBP16.1■□□□□ 0.17
CLK3-211ENST00000563297 SRGAP2O75044 1071 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 ZNF821O75541 412 aaPredicted RBP16.1■□□□□ 0.17
CLK3-211ENST00000563297 MMEP08473 750 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 CLCN6P51797 869 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 CCDC15Q0P6D6 951 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 COL9A2Q14055 689 aaPredicted RBP16.1■□□□□ 0.17
CLK3-211ENST00000563297 ARSIQ5FYB1 569 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 C6orf118Q5T5N4 469 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 DPY19L3Q6ZPD9 716 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 PDZD3Q86UT5 571 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 TMEM145Q8NBT3 493 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 CPA5Q8WXQ8 436 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 CCDC114Q96M63 670 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 CFAP57Q96MR6 1250 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 TNKS2Q9H2K2 1166 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 SCUBE2Q9NQ36 999 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 BAHCC1Q9P281 2608 aa16.1■□□□□ 0.17
CLK3-211ENST00000563297 ZMPSTE24O75844 475 aa16.09■□□□□ 0.17
CLK3-211ENST00000563297 ENDOD1O94919 500 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms