RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 NME1P15531 152 aaKnown RBP8.55□□□□□ -1.04
CKLF-208ENST00000563092 TACR2P21452 398 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 RBMS1P29558 406 aaKnown RBP8.55□□□□□ -1.04
CKLF-208ENST00000563092 MXI1P50539 228 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 NFATC3Q12968 1075 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 FZD2Q14332 565 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 CNGA2Q16280 664 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 HS1BP3Q53T59 392 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 C3orf38Q5JPI3 329 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 CLEC18BQ6UXF7 455 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 PRICKLE2Q7Z3G6 844 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 HORMAD1Q86X24 394 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 DCP2Q8IU60 420 aaKnown RBP8.55□□□□□ -1.04
CKLF-208ENST00000563092 GUF1Q8N442 669 aaKnown RBP8.55□□□□□ -1.04
CKLF-208ENST00000563092 CLEC18CQ8NCF0 446 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 ZNF548Q8NEK5 533 aaPredicted RBP8.55□□□□□ -1.04
CKLF-208ENST00000563092 TPCN2Q8NHX9 752 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 OR8D1Q8WZ84 308 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 ERCC4Q92889 916 aaPredicted RBP8.55□□□□□ -1.04
CKLF-208ENST00000563092 BMFQ96LC9 184 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 ZNF396Q96N95 335 aaPredicted RBP8.55□□□□□ -1.04
CKLF-208ENST00000563092 CCNL2Q96S94 520 aaPredicted RBP8.55□□□□□ -1.04
CKLF-208ENST00000563092 ABCG4Q9H172 646 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 EVA1BQ9NVM1 165 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 SERTAD1Q9UHV2 236 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 SALL4Q9UJQ4 1053 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 ZFR2Q9UPR6 939 aaKnown RBP8.55□□□□□ -1.04
CKLF-208ENST00000563092 PCDHGA7Q9Y5G6 932 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 HS3ST3A1Q9Y663 406 aa8.55□□□□□ -1.04
CKLF-208ENST00000563092 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 SPTY2D1-AS1A0A0U1RR47 76 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 KCNU1A8MYU2 1149 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 C1QTNF3-AMACRE9PGA6 284 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 RNF103O00237 685 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 NTN3O00634 580 aaPredicted RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 TPP1O14773 563 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 SLC31A1O15431 190 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 NEBLO76041 1014 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 AFPP02771 609 aaKnown RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 PAEPP09466 180 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 PRLRP16471 622 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 HNRNPA2B1P22626 353 aaKnown RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 RPL13P26373 211 aaKnown RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 AKT2P31751 481 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 NNMTP40261 264 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 SLC19A1P41440 591 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 OXCT1P55809 520 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 HNRNPKP61978 463 aaKnown RBP eCLIP8.54□□□□□ -1.04
CKLF-208ENST00000563092 ZNF177Q13360 481 aaPredicted RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 ADAM9Q13443 819 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 EDRF1Q3B7T1 1238 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 POM121L1PQ3SYA9 428 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 CBWD6Q4V339 395 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 CBWD3Q5JTY5 395 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 CBWD5Q5RIA9 395 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 TTC39BQ5VTQ0 682 aaPredicted RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 GUSBP11Q6P575 273 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 KYAT3Q6YP21 454 aaKnown RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 ZNF574Q6ZN55 896 aaPredicted RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 ATG14Q6ZNE5 492 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 RBM44Q6ZP01 1051 aaKnown RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 TAC4Q86UU9 113 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 CCDC117Q8IWD4 279 aaPredicted RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 CEP57L1Q8IYX8 460 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 LGI2Q8N0V4 545 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 CCAR2Q8N163 923 aaKnown RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 ARL14Q8N4G2 192 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 SH2D3CQ8N5H7 860 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 OR52K2Q8NGK3 314 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 WDR36Q8NI36 951 aaKnown RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 WDR48Q8TAF3 677 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 LIN37Q96GY3 246 aaPredicted RBP8.54□□□□□ -1.04
CKLF-208ENST00000563092 BTN2A3PQ96KV6 586 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 FEM1AQ9BSK4 669 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 BOCQ9BWV1 1114 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 HDAC8Q9BY41 377 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 TRIM4Q9C037 500 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 OSBPL2Q9H1P3 480 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 MMRN2Q9H8L6 949 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 FAM13BQ9NYF5 915 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 KLF15Q9UIH9 416 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 NAALADL1Q9UQQ1 740 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 HS3ST2Q9Y278 367 aa8.54□□□□□ -1.04
CKLF-208ENST00000563092 DOCK9Q9BZ29 2069 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 CCDC187A0A096LP49 1063 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 POM121BA6NF01 834 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 TCAF2A6NFQ2 919 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 A6NNZ2 444 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 RNF225M0QZC1 329 aaPredicted RBP8.53□□□□□ -1.04
CKLF-208ENST00000563092 CASC3O15234 703 aaKnown RBP8.53□□□□□ -1.04
CKLF-208ENST00000563092 STX10O60499 249 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 TNFSF15O95150 251 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 NEFLP07196 543 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 CD19P15391 556 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 PDGFRAP16234 1089 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 RGS7P49802 495 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 CLDN2P57739 230 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 YWHAEP62258 255 aaKnown RBP8.53□□□□□ -1.04
CKLF-208ENST00000563092 FGL2Q14314 439 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms