RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 STAP1Q9ULZ2 295 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 TBC1D30Q9Y2I9 924 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 OR51B4Q9Y5P0 310 aa13.31□□□□□ -0.28
SF3B3-202ENST00000562722 FASNP49327 2511 aaKnown RBP13.3□□□□□ -0.28
SF3B3-202ENST00000562722 FAM170AA1A519 330 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 K7ERQ8 282 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 TRIM38O00635 465 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 BRINP1O60477 761 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 GADD45BO75293 160 aaPredicted RBP13.3□□□□□ -0.28
SF3B3-202ENST00000562722 MT-CO1P00395 513 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 PRNPP04156 253 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 CTSLP07711 333 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 ACP1P24666 158 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 TAS2R38P59533 333 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 DEUP1Q05D60 604 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 KCNMA1Q12791 1236 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 ZNF211Q13398 564 aaPredicted RBP13.3□□□□□ -0.28
SF3B3-202ENST00000562722 RTP5Q14D33 572 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 TPD52L1Q16890 204 aaPredicted RBP13.3□□□□□ -0.28
SF3B3-202ENST00000562722 PROX2Q3B8N5 592 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 PTPN20Q4JDL3 420 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 ALFQ53S48 1182 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 PIP5KL1Q5T9C9 394 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 LINGO4Q6UY18 593 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 SLC26A9Q7LBE3 791 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 KANSL1Q7Z3B3 1105 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 TFAP2DQ7Z6R9 452 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 SLC47A2Q86VL8 602 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 HORMAD1Q86X24 394 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 TNKS2Q9H2K2 1166 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 RRN3Q9NYV6 651 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.3□□□□□ -0.28
SF3B3-202ENST00000562722 DNAJC12Q9UKB3 198 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 HS3ST2Q9Y278 367 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 PAXBP1Q9Y5B6 917 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 SNX10Q9Y5X0 201 aa13.3□□□□□ -0.28
SF3B3-202ENST00000562722 SMG1Q96Q15 3661 aaKnown RBP13.3□□□□□ -0.28
SF3B3-202ENST00000562722 ENDOD1O94919 500 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 PNMA6AP0CW24 399 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-202ENST00000562722 ALPPL2P10696 532 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 HNRNPA2B1P22626 353 aaKnown RBP13.29□□□□□ -0.28
SF3B3-202ENST00000562722 DGKAP23743 735 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 PON1P27169 355 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 ACTN2P35609 894 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 DNA2P51530 1060 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 CLDN2P57739 230 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 E2F1Q01094 437 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 INSM1Q01101 510 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-202ENST00000562722 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-202ENST00000562722 BRMS1LQ5PSV4 323 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 FAM102AQ5T9C2 384 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-202ENST00000562722 NEK5Q6P3R8 708 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 PTAR1Q7Z6K3 402 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-202ENST00000562722 ZDHHC17Q8IUH5 632 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 SLC25A45Q8N413 288 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 DCAF4L2Q8NA75 395 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 TMEM145Q8NBT3 493 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 CHST14Q8NCH0 376 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 TMIEQ8NEW7 156 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 ZNF397Q8NF99 534 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-202ENST00000562722 OR13H1Q8NG92 308 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 OR2A12Q8NGT7 310 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 FGF11Q92914 225 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 ARRDC3Q96B67 414 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 PPP1R16AQ96I34 528 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 FCRL3Q96P31 734 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-202ENST00000562722 PSMB7Q99436 277 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 SPON2Q9BUD6 331 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 KLHL11Q9NVR0 708 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 UCKL1Q9NWZ5 548 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 MPP6Q9NZW5 540 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 IL36AQ9UHA7 158 aa13.29□□□□□ -0.28
SF3B3-202ENST00000562722 AJAP1Q9UKB5 411 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-202ENST00000562722 A0A0D9SEW6 157 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 GTPBP10A4D1E9 387 aaKnown RBP13.28□□□□□ -0.28
SF3B3-202ENST00000562722 FOXN3O00409 490 aaPredicted RBP13.28□□□□□ -0.28
SF3B3-202ENST00000562722 SMAD6O43541 496 aaKnown RBP13.28□□□□□ -0.28
SF3B3-202ENST00000562722 SRGAP2O75044 1071 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 MT-CO3P00414 261 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 F9P00740 461 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 TFE3P19532 575 aaPredicted RBP13.28□□□□□ -0.28
SF3B3-202ENST00000562722 OR1E1P30953 314 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 CXCR3P49682 368 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 CLCN6P51797 869 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 CCDC173Q0VFZ6 552 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 CAMK4Q16566 473 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 ZNF284Q2VY69 593 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 C5orf22Q49AR2 442 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 ARSIQ5FYB1 569 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 OTUD1Q5VV17 481 aaPredicted RBP13.28□□□□□ -0.28
SF3B3-202ENST00000562722 SEL1L3Q68CR1 1132 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 C22orf39Q6P5X5 142 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 ERN2Q76MJ5 926 aaKnown RBP13.28□□□□□ -0.28
SF3B3-202ENST00000562722 SETD3Q86TU7 594 aaPredicted RBP13.28□□□□□ -0.28
SF3B3-202ENST00000562722 DCBLD1Q8N8Z6 715 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 TMEM35BQ8NCS4 154 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 OR4C6Q8NH72 309 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 RFFLQ8WZ73 363 aa13.28□□□□□ -0.28
SF3B3-202ENST00000562722 NPY6RQ99463 290 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms