RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CMTR2Q8IYT2 770 aaKnown RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 FUKQ8N0W3 1084 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 PTCD2Q8WV60 388 aaKnown RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 OVCA2Q8WZ82 227 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 SCLYQ96I15 445 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 TOX2Q96NM4 488 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 QKIQ96PU8 341 aaKnown RBP eCLIP7.68□□□□□ -1.18
TCF4-216ENST00000562680 LATS2Q9NRM7 1088 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 ANKRD6Q9Y2G4 727 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 DOCK1Q14185 1865 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 SYCE1LA8MT33 242 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 FGF1P05230 155 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 ALOX15P16050 662 aaPredicted RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 LMO2P25791 158 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 DDX6P26196 483 aaKnown RBP eCLIP7.68□□□□□ -1.18
TCF4-216ENST00000562680 SERPINB4P48594 390 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 NDST2P52849 883 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 NAA20P61599 178 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 TRIM60Q495X7 471 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 SYCP2LQ5T4T6 812 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 SH2D3CQ8N5H7 860 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 CMASQ8NFW8 434 aaPredicted RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 SNRNP27Q8WVK2 155 aaKnown RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 E2F7Q96AV8 911 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 PPP1R10Q96QC0 940 aaKnown RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 OSBPL2Q9H1P3 480 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 MAGEH1Q9H213 219 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 KIAA1522Q9P206 1035 aaPredicted RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 ZFP69BQ9UJL9 534 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 TNS1Q9HBL0 1735 aaKnown RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 ENPP3O14638 875 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 IRAK2O43187 625 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 MAP3K7O43318 606 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 ACSL4O60488 711 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 SYNCRIPO60506 623 aaKnown RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 NCF2P19878 526 aaPredicted RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 CCNCP24863 283 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 CSE1LP55060 971 aaKnown RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 SKOR1P84550 965 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 TBL3Q12788 808 aaKnown RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 MRPL28Q13084 256 aaKnown RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 C1orf220Q5T0J3 134 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 OTOP2Q7RTS6 562 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 TTC30AQ86WT1 665 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 ETNK1Q9HBU6 452 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 MOSPD1Q9UJG1 213 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 FBXW11Q9UKB1 542 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 FAM50BQ9Y247 325 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 STK38LQ9Y2H1 464 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 MTO1Q9Y2Z2 717 aaKnown RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 A0A1B0GVM2 712 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 TCAF2A6NFQ2 919 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 SLC38A8A6NNN8 435 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 SLCO1B7G3V0H7 640 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 STK25O00506 426 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 ASMTLO95671 621 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 ADH1CP00326 375 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 PYGBP11216 843 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 HOXA11P31270 313 aaPredicted RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 LSP1P33241 339 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 PHEXP78562 749 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 RAB30Q15771 203 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 IMPG1Q17R60 797 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 CEP78Q5JTW2 689 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 MROH9Q5TGP6 573 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 LVRNQ6Q4G3 990 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 AGMOQ6ZNB7 445 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 TAC4Q86UU9 113 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 C7orf61Q8IZ16 206 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 PLD5Q8N7P1 536 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 HDAC7Q8WUI4 952 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 SLCO2A1Q92959 643 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 PPP1R16AQ96I34 528 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 LRGUKQ96M69 825 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 TLE6Q9H808 572 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 SCHIP1Q9P0W5 487 aaPredicted RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 BAG5Q9UL15 447 aa7.68□□□□□ -1.18
TCF4-216ENST00000562680 USP15Q9Y4E8 981 aaPredicted RBP7.68□□□□□ -1.18
TCF4-216ENST00000562680 SRRM3A6NNA2 597 aaPredicted RBP7.67□□□□□ -1.18
TCF4-216ENST00000562680 ALOX15BO15296 676 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 SRP72O76094 671 aaKnown RBP7.67□□□□□ -1.18
TCF4-216ENST00000562680 ZNF7P17097 686 aaPredicted RBP7.67□□□□□ -1.18
TCF4-216ENST00000562680 PTPN2P17706 415 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 CBX3Q13185 183 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 CYLC2Q14093 348 aaPredicted RBP7.67□□□□□ -1.18
TCF4-216ENST00000562680 CCSAPQ6IQ19 270 aaPredicted RBP7.67□□□□□ -1.18
TCF4-216ENST00000562680 STRA8Q7Z7C7 330 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 TDRD5Q8NAT2 981 aaKnown RBP7.67□□□□□ -1.18
TCF4-216ENST00000562680 SMG8Q8ND04 991 aaKnown RBP7.67□□□□□ -1.18
TCF4-216ENST00000562680 ACMSDQ8TDX5 336 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 CSGALNACT1Q8TDX6 532 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 C5orf60A6NFR6 353 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 TCP11X1B4DZS4 312 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 MEFVO15553 781 aaPredicted RBP7.67□□□□□ -1.18
TCF4-216ENST00000562680 LZTS3O60299 673 aaPredicted RBP7.67□□□□□ -1.18
TCF4-216ENST00000562680 TBC1D4O60343 1298 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 TSPAN3O60637 253 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 IQCF3P0C7M6 154 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 CHRM3P20309 590 aa7.67□□□□□ -1.18
TCF4-216ENST00000562680 ADRA1DP25100 572 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms