RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 SKOR2Q2VWA4 1001 aaPredicted RBP18.23■□□□□ 0.51
CMTM3-204ENST00000562357 SLC45A4Q5BKX6 768 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 TBC1D3GQ6DHY5 549 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 TBC1D3CQ6IPX1 549 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 C22orf39Q6P5X5 142 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 LINGO4Q6UY18 593 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 LUZP1Q86V48 1076 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 TBC1D3Q8IZP1 549 aaPredicted RBP18.23■□□□□ 0.51
CMTM3-204ENST00000562357 CCDC185Q8N715 623 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 C1orf216Q8TAB5 229 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 NAP1L5Q96NT1 182 aaPredicted RBP18.23■□□□□ 0.51
CMTM3-204ENST00000562357 EPAS1Q99814 870 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 ACE2Q9BYF1 805 aaPredicted RBP18.23■□□□□ 0.51
CMTM3-204ENST00000562357 KDM4CQ9H3R0 1056 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 HAUS4Q9H6D7 363 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 AIPL1Q9NZN9 384 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 PPM1HQ9ULR3 514 aa18.23■□□□□ 0.51
CMTM3-204ENST00000562357 PCDH15Q96QU1 1955 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 KPNA3O00505 521 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-204ENST00000562357 RAMP2O60895 175 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 LRIG2O94898 1065 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 PMLP29590 882 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 CHRNA3P32297 505 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 SERPINH1P50454 418 aaKnown RBP18.22■□□□□ 0.51
CMTM3-204ENST00000562357 UBASH3AP57075 661 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 SCAPQ12770 1279 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 NR1I3Q14994 352 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 SUZ12Q15022 739 aaKnown RBP18.22■□□□□ 0.51
CMTM3-204ENST00000562357 HLA-BQ31612 363 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 POM121L1PQ3SYA9 428 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 RAB6CQ53S08 254 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 MANEALQ5VSG8 457 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 PIP4P1Q86T03 277 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 PRPF39Q86UA1 669 aaKnown RBP18.22■□□□□ 0.51
CMTM3-204ENST00000562357 ZNF354CQ86Y25 554 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 IQCDQ96DY2 449 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 TRIM11Q96F44 468 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 PPP1R16AQ96I34 528 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 CEP44Q9C0F1 390 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 RAB6CQ9H0N0 254 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 AASDHPPTQ9NRN7 309 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 TMEM248Q9NWD8 314 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 DNAI1Q9UI46 699 aa18.22■□□□□ 0.51
CMTM3-204ENST00000562357 CACNA1EQ15878 2313 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 TCRBV5S1A1TA0A578 114 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 K7ERQ8 282 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 TPM3P06753 285 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 ZNF883P0CG24 379 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 CD59P13987 128 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 PSMA2P25787 234 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 EPHB2P29323 1055 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 L1CAMP32004 1257 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 DRD3P35462 400 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 NUDT1P36639 197 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 PRKCIP41743 596 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 DNA2P51530 1060 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 RPL7AP62424 266 aaKnown RBP18.21■□□□□ 0.51
CMTM3-204ENST00000562357 FANCCQ00597 558 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 NUMA1Q14980 2115 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 TDRD12Q587J7 1177 aaKnown RBP18.21■□□□□ 0.51
CMTM3-204ENST00000562357 FIGNQ5HY92 759 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 TMC6Q7Z403 805 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 VPS36Q86VN1 386 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 NAXDQ8IW45 347 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 PCDH20Q8N6Y1 951 aaKnown RBP18.21■□□□□ 0.51
CMTM3-204ENST00000562357 OR2A12Q8NGT7 310 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 SYT11Q9BT88 431 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 MAGEH1Q9H213 219 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 CATSPERBQ9H7T0 1116 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 TM7SF3Q9NS93 570 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 DONSONQ9NYP3 566 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 TAS2R14Q9NYV8 317 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 ZNF212Q9UDV6 495 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 IL36AQ9UHA7 158 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 SARDHQ9UL12 918 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 ANKRD6Q9Y2G4 727 aa18.21■□□□□ 0.51
CMTM3-204ENST00000562357 CXorf51AA0A1B0GTR3 108 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 CREB3O43889 395 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 GJB3O75712 270 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 GZMAP12544 262 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 GLDCP23378 1020 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 SIM1P81133 766 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-204ENST00000562357 CNTN1Q12860 1018 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 FOXC1Q12948 553 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 POLD3Q15054 466 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-204ENST00000562357 KIF19Q2TAC6 998 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 PPP1R15BQ5SWA1 713 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 ZNF571Q7Z3V5 609 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-204ENST00000562357 TMIEQ8NEW7 156 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 GRIN3AQ8TCU5 1115 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 SERAC1Q96JX3 654 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 SLC6A18Q96N87 628 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 TTYH3Q9C0H2 523 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 TNKS2Q9H2K2 1166 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 BZW2Q9Y6E2 419 aaKnown RBP18.2■□□□□ 0.5
CMTM3-204ENST00000562357 SCINQ9Y6U3 715 aa18.2■□□□□ 0.5
CMTM3-204ENST00000562357 ASCC3Q8N3C0 2202 aaKnown RBP18.2■□□□□ 0.5
CMTM3-204ENST00000562357 FAM72CH0Y354 149 aa18.19■□□□□ 0.5
CMTM3-204ENST00000562357 VILLO15195 856 aa18.19■□□□□ 0.5
CMTM3-204ENST00000562357 SMAD6O43541 496 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms