RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TRIM69Q86WT6 500 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 DEFB106AQ8N104 65 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 ATP6V0D2Q8N8Y2 350 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 ATP11CQ8NB49 1132 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 TMEM145Q8NBT3 493 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 ALG14Q96F25 216 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 BTN2A3PQ96KV6 586 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 DEPDC7Q96QD5 511 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 FEM1AQ9BSK4 669 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 TCEAL2Q9H3H9 227 aaPredicted RBP11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 ASCL3Q9NQ33 180 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 KLF15Q9UIH9 416 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 GGT7Q9UJ14 662 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 SCN8AQ9UQD0 1980 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 FLNCQ14315 2725 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 PTPN13Q12923 2485 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 ZFC3H1O60293 1989 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 NBPF19A0A087WUL8 3843 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 TCAF2A6NFQ2 919 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 C1QTNF3-AMACRE9PGA6 284 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 K7ESM1 405 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 MUSKO15146 869 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 CDK4P11802 303 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 CKMT1AP12532 417 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 GKP32189 559 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 USP8P40818 1118 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 C1orf61Q13536 156 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 AUHQ13825 339 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 FGL2Q14314 439 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 ALFQ53S48 1182 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 ARSIQ5FYB1 569 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 PERM1Q5SV97 790 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 ATL3Q6DD88 541 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 EFL1Q7Z2Z2 1120 aaKnown RBP11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 DSG4Q86SJ6 1040 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 RBFAQ8N0V3 343 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 SH2D3CQ8N5H7 860 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 ZNF557Q8N988 423 aaPredicted RBP11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 KDM1BQ8NB78 822 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 OR6K2Q8NGY2 324 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 LMO3Q8TAP4 145 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 TTC9Q92623 222 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 FAXDC2Q96IV6 333 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 HSFY1Q96LI6 401 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 PSMB7Q99436 277 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 POLR1BQ9H9Y6 1135 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 POPDC2Q9HBU9 364 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 PLCB1Q9NQ66 1216 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 ANLNQ9NQW6 1124 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 KIAA1257Q9ULG3 409 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 ITM2BQ9Y287 266 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 HS3ST4Q9Y661 456 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 LRP4O75096 1905 aa11.98□□□□□ -0.49
NSMCE1-202ENST00000561960 UBR5O95071 2799 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 A0A0D9SEW6 157 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 ATP9BO43861 1147 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 ADCY5O95622 1261 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 IGLV3-25P01717 112 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 AKT2P31751 481 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 CHRNA3P32297 505 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 DNA2P51530 1060 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 STX17P56962 302 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 FKBP3Q00688 224 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 E2F1Q01094 437 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 ZNF177Q13360 481 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 PDCLQ13371 301 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 RABGAP1LQ5R372 815 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 ZNF658Q5TYW1 1059 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 FAM46CQ5VWP2 391 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 LEKR1Q6ZMV7 388 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 FAM183BPQ6ZVS7 135 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 IQCHQ86VS3 1027 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 HORMAD1Q86X24 394 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 NETO2Q8NC67 525 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 ZNF548Q8NEK5 533 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 OR7D4Q8NG98 312 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 OR2A12Q8NGT7 310 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 LMX1AQ8TE12 382 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 SNX21Q969T3 373 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 FAM131CQ96AQ9 280 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 PPP1R13BQ96KQ4 1090 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 ZNF578Q96N58 590 aaPredicted RBP11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 CPXM1Q96SM3 734 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 INTS2Q9H0H0 1204 aaKnown RBP11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 KLHL11Q9NVR0 708 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 MPP6Q9NZW5 540 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 VPS51Q9UID3 782 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 CTNND2Q9UQB3 1225 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 DMTF1Q9Y222 760 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 OR51B4Q9Y5P0 310 aa11.97□□□□□ -0.49
NSMCE1-202ENST00000561960 FAM237AA0A1B0GTK4 181 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 I6L893 689 aaPredicted RBP11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 MCF2LO15068 1137 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 SLC7A4O43246 635 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 SPINT1O43278 529 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 MAGEC1O60732 1142 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 PAGE1O75459 146 aa11.96□□□□□ -0.49
NSMCE1-202ENST00000561960 PAK4O96013 591 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms