RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SAR1AQ9NR31 198 aa9.99□□□□□ -0.81
SMG1-205ENST00000561947 OLA1Q9NTK5 396 aaKnown RBP9.99□□□□□ -0.81
SMG1-205ENST00000561947 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMG1-205ENST00000561947 PPARGC1AQ9UBK2 798 aaKnown RBP9.99□□□□□ -0.81
SMG1-205ENST00000561947 HCSTQ9UBK5 93 aa9.99□□□□□ -0.81
SMG1-205ENST00000561947 IPO11Q9UI26 975 aaKnown RBP9.99□□□□□ -0.81
SMG1-205ENST00000561947 SLC27A5Q9Y2P5 690 aa9.99□□□□□ -0.81
SMG1-205ENST00000561947 NUMBLQ9Y6R0 609 aa9.99□□□□□ -0.81
SMG1-205ENST00000561947 SCN5AQ14524 2016 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 TANC1Q9C0D5 1861 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 MIA3Q5JRA6 1907 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 HOXA2O43364 376 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 DNAJC6O75061 913 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 VNN2O95498 520 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 PROCP04070 461 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 T-ENOLP0DO92 83 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 MYL2P10916 166 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 ADRA1AP35348 466 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 PSEN1P49768 467 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 NDST2P52849 883 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 CDK18Q07002 472 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 ELAVL2Q12926 359 aaKnown RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 STX3Q13277 289 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 GPR17Q13304 367 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 MPP3Q13368 585 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 TCTN1Q2MV58 587 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 ANO4Q32M45 955 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 MGAT5BQ3V5L5 792 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 MS4A13Q5J8X5 152 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 PPM1JQ5JR12 505 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 PCID2Q5JVF3 399 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 NPAS4Q8IUM7 802 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 CCDC117Q8IWD4 279 aaPredicted RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 INPP5DQ92835 1189 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 AZIN2Q96A70 460 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 MCMBPQ9BTE3 642 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 FICDQ9BVA6 458 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 ZYG11BQ9C0D3 744 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 TLR8Q9NR97 1041 aaKnown RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 IARS2Q9NSE4 1012 aaKnown RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 COMMD8Q9NX08 183 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 HAO1Q9UJM8 370 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 H7C4K7 107 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 PITPNM1O00562 1244 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 TBC1D4O60343 1298 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 ATP6V1G2O95670 118 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 PRKCGP05129 697 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 HAPLN1P10915 354 aaPredicted RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 PRMT2P55345 433 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 RPL10AP62906 217 aaKnown RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 SMARCB1Q12824 385 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 TAF10Q12962 218 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 RIPK1Q13546 671 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 PSMD5Q16401 504 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 CTC1Q2NKJ3 1217 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 RTP2Q5QGT7 225 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 MBLAC2Q68D91 279 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 PDPK2PQ6A1A2 396 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 DENND5AQ6IQ26 1287 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 FSTL4Q6MZW2 842 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 PKN3Q6P5Z2 889 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 RSPO2Q6UXX9 243 aaPredicted RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 RNF19BQ6ZMZ0 732 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 FAM43BQ6ZT52 329 aaPredicted RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 CMC1Q7Z7K0 106 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 CRLF3Q8IUI8 442 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 FATE1Q969F0 183 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 ATXN7L3BQ96GX2 97 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 BTN2A3PQ96KV6 586 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 SPATA17Q96L03 361 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 RAB3IPQ96QF0 476 aaPredicted RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 SEPT5Q99719 369 aaPredicted RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 TMEM175Q9BSA9 504 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 MRPL9Q9BYD2 267 aaKnown RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 ZNF395Q9H8N7 513 aaPredicted RBP9.98□□□□□ -0.81
SMG1-205ENST00000561947 ENTPD7Q9NQZ7 604 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 TMEM248Q9NWD8 314 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 NSMCE4AQ9NXX6 385 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 KCNK4Q9NYG8 393 aa9.98□□□□□ -0.81
SMG1-205ENST00000561947 IGLV3-10A0A075B6K4 115 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 TIMM44O43615 452 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 FKTNO75072 461 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 NEBLO76041 1014 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 HAUS5O94927 633 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 CBX6O95503 412 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 TBX18O95935 607 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 PEX11BO96011 259 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 MPOP05164 745 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 GALTP07902 379 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 F7P08709 466 aaPredicted RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 FGF3P11487 239 aaPredicted RBP9.97□□□□□ -0.81
SMG1-205ENST00000561947 SERPINB3P29508 390 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 ZBTB16Q05516 673 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 PCLAFQ15004 111 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 ARHGEF6Q15052 776 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 C10orf120Q5SQS8 335 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 RASIP1Q5U651 963 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 ZCCHC23Q6ZST2 131 aa9.97□□□□□ -0.81
SMG1-205ENST00000561947 TFAP2DQ7Z6R9 452 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms