RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 YJEFN3A6XGL0 299 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 TXNDC9O14530 226 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
NEIL1-202ENST00000561643 NCAM1P13591 858 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 LIMK2P53671 638 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 GRB14Q14449 540 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 MFSD10Q14728 455 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 RALGPS1Q5JS13 557 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 BNIPLQ7Z465 357 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 SREK1Q8WXA9 508 aaKnown RBP11.17□□□□□ -0.62
NEIL1-202ENST00000561643 MFSD3Q96ES6 412 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 ARPC5LQ9BPX5 153 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CACNG4Q9UBN1 327 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 TBC1D30Q9Y2I9 924 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 LOC100653049A0A140TA62 436 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 TREHO43280 583 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 KRT34O76011 436 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 HARS2P49590 506 aaKnown RBP11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CLCN2P51788 898 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 PPP2R5DQ14738 602 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 DLG2Q15700 870 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 ANKRD20A4Q4UJ75 823 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 XKR4Q5GH76 650 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CERCAMQ5T4B2 595 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.17□□□□□ -0.62
NEIL1-202ENST00000561643 ZBTB8BQ8NAP8 495 aaPredicted RBP11.17□□□□□ -0.62
NEIL1-202ENST00000561643 NPLOC4Q8TAT6 608 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 AGR3Q8TD06 166 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CCDC124Q96CT7 223 aaKnown RBP11.17□□□□□ -0.62
NEIL1-202ENST00000561643 ZFP42Q96MM3 310 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CATSPER2Q96P56 530 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 ANLNQ9NQW6 1124 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 C20orf96Q9NUD7 363 aaPredicted RBP11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CDY2AQ9Y6F7 541 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CDY1Q9Y6F8 540 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 BOLA2-SMG1P6H3BVE0 249 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 FYNP06241 537 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 USP17L7P0C7H9 530 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 MYL4P12829 197 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 ARL13BQ3SXY8 428 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CTU1Q7Z7A3 348 aaKnown RBP11.17□□□□□ -0.62
NEIL1-202ENST00000561643 TMEM135Q86UB9 458 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 NPWQ8N729 165 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 SMG8Q8ND04 991 aaKnown RBP11.17□□□□□ -0.62
NEIL1-202ENST00000561643 SHKBP1Q8TBC3 707 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CMTM5Q96DZ9 223 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 SLC9A7Q96T83 725 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CCDC28BQ9BUN5 200 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 GPAMQ9HCL2 828 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 CIDEBQ9UHD4 219 aa11.17□□□□□ -0.62
NEIL1-202ENST00000561643 TMEM221A6NGB7 291 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 NCAM2O15394 837 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 FKBP6O75344 327 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 PDE5AO76074 875 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 FBXO21O94952 628 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 TPH1P17752 444 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 IGFBP6P24592 240 aaPredicted RBP11.16□□□□□ -0.62
NEIL1-202ENST00000561643 DAOAP59103 153 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 IRF9Q00978 393 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 PPIDQ08752 370 aaKnown RBP11.16□□□□□ -0.62
NEIL1-202ENST00000561643 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 ITPRIPL1Q6GPH6 555 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 KLC3Q6P597 504 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 RBM44Q6ZP01 1051 aaKnown RBP11.16□□□□□ -0.62
NEIL1-202ENST00000561643 PLEKHH3Q7Z736 793 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 ZNF554Q86TJ5 538 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 KCNMB4Q86W47 210 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 ZNF781Q8N8C0 355 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 NTAN1Q96AB6 310 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 KCNK16Q96T55 309 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 CORO1BQ9BR76 489 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 OXCT2Q9BYC2 517 aaPredicted RBP11.16□□□□□ -0.62
NEIL1-202ENST00000561643 GBA3Q9H227 469 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 WDR6Q9NNW5 1121 aaKnown RBP11.16□□□□□ -0.62
NEIL1-202ENST00000561643 CASS4Q9NQ75 786 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 MAN1C1Q9NR34 630 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 UBP1Q9NZI7 540 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 PAIP2BQ9ULR5 123 aaKnown RBP11.16□□□□□ -0.62
NEIL1-202ENST00000561643 PCDHB12Q9Y5F1 795 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 TIMM13Q9Y5L4 95 aaPredicted RBP11.16□□□□□ -0.62
NEIL1-202ENST00000561643 ZCWPW2A0A1B0GU75 182 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 CCDC78A2IDD5 438 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 E9PBE3 544 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 GOLGA8TH3BQL2 631 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 I6L893 689 aaPredicted RBP11.16□□□□□ -0.62
NEIL1-202ENST00000561643 DCXO43602 365 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 KLHL41O60662 606 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 AMHP03971 560 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 NFKB1P19838 968 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 SAT1P21673 171 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 CRABP2P29373 138 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 AIF1P55008 147 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 ZBTB17Q13105 803 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 ACAD11Q709F0 780 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 URGCPQ8TCY9 931 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 PYDC1Q8WXC3 89 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 LZICQ8WZA0 190 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 COG4Q9H9E3 785 aa11.16□□□□□ -0.62
NEIL1-202ENST00000561643 RRAGCQ9HB90 399 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms