RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 NEU3Q9UQ49 428 aa17.61■□□□□ 0.41
CDC42BPB-208ENST00000561271 ILVBLA1L0T0 632 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 C10orf142B7Z368 130 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 FAM72CH0Y354 149 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 CBX4O00257 560 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 MCF2LO15068 1137 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 CTSLP07711 333 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 ZNF883P0CG24 379 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 FERP16591 822 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 ADRA1BP35368 520 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 CCR5P51681 352 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 ARL13BQ3SXY8 428 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 FAM72AQ5TYM5 149 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 AGBL4Q5VU57 503 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 FAM46CQ5VWP2 391 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 FAM72DQ6L9T8 149 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 WDR59Q6PJI9 974 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 FAM72BQ86X60 149 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 BAP1Q92560 729 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 FAM131CQ96AQ9 280 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 MCEEQ96PE7 176 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 TNKS2Q9H2K2 1166 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 RTN4Q9NQC3 1192 aaKnown RBP17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 PPARGC1AQ9UBK2 798 aaKnown RBP17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 OR12D3Q9UGF7 316 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 PPM1HQ9ULR3 514 aa17.6■□□□□ 0.41
CDC42BPB-208ENST00000561271 TBC1D3DA0A087WVF3 549 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TBC1D3IA0A087WXS9 549 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TBC1D3EA0A087X179 549 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TBC1D3KA0A087X1G2 549 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TCRBV5S1A1TA0A578 114 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TBC1D3FA6NER0 549 aaPredicted RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TBC1D3LB9A6J9 549 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 KCNK3O14649 394 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 WNT9AO14904 365 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 CCP110O43303 1012 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 PLRG1O43660 514 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 HYAL3O43820 417 aaPredicted RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 WNT1P04628 370 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TBC1D3HP0C7X1 549 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 CTSKP43235 329 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 ZNF165P49910 485 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 RACK1P63244 317 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 ARF5P84085 180 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 IL9RQ01113 521 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 NRG1Q02297 640 aaPredicted RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 GNA12Q03113 381 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TBC1D3GQ6DHY5 549 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TBC1D3CQ6IPX1 549 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 RWDD4Q6NW29 188 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 ZNF783Q6ZMS7 281 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TBC1D3Q8IZP1 549 aaPredicted RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 CHST14Q8NCH0 376 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 OR2A12Q8NGT7 310 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 GRIN3AQ8TCU5 1115 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 SETD7Q8WTS6 366 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 CENPIQ92674 756 aaPredicted RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 CCDC114Q96M63 670 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 FUCA2Q9BTY2 467 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 SCNM1Q9BWG6 230 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 ACE2Q9BYF1 805 aaPredicted RBP17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 AASDHPPTQ9NRN7 309 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 NDFIP2Q9NV92 336 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 TAS2R14Q9NYV8 317 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 PCOLCE2Q9UKZ9 415 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 PCDHB9Q9Y5E1 797 aa17.59■□□□□ 0.41
CDC42BPB-208ENST00000561271 LRRC53A6NM62 1247 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 SIGLEC16A6NMB1 481 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 SMTNL1A8MU46 457 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 H0Y8X5 98 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 RNF103O00237 685 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 KPNA3O00505 521 aaPredicted RBP17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 SLC7A4O43246 635 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 ZMPSTE24O75844 475 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 LRIG2O94898 1065 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 MAT2AP31153 395 aaKnown RBP17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 CHRNA3P32297 505 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 ACVRL1P37023 503 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 SERPINH1P50454 418 aaKnown RBP17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 CCT8P50990 548 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 CLCN6P51797 869 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 C21orf59P57076 290 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 RPL7AP62424 266 aaKnown RBP17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 HNRNPDQ14103 355 aaKnown RBP17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 TRIP6Q15654 476 aaKnown RBP17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 E4F1Q66K89 784 aaPredicted RBP17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 NTAN1Q96AB6 310 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 ARRDC3Q96B67 414 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 TBC1D31Q96DN5 1066 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 SERAC1Q96JX3 654 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 SYT11Q9BT88 431 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 DNAI1Q9UI46 699 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 BTBD3Q9Y2F9 522 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 ACTL7AQ9Y615 435 aa17.58■□□□□ 0.4
CDC42BPB-208ENST00000561271 SYCE3A1L190 88 aa17.57■□□□□ 0.4
CDC42BPB-208ENST00000561271 TMCO5BA8MYB1 307 aa17.57■□□□□ 0.4
CDC42BPB-208ENST00000561271 VILLO15195 856 aa17.57■□□□□ 0.4
CDC42BPB-208ENST00000561271 FLRT2O43155 660 aa17.57■□□□□ 0.4
CDC42BPB-208ENST00000561271 ATMINO43313 823 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms