RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PHF12Q96QT6 1004 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 RANBP9Q96S59 729 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 SNRNP25Q9BV90 132 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 FRMD8Q9BZ67 464 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 TSPYL2Q9H2G4 693 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
RABGGTA-220ENST00000560998 KPNA7A9QM74 516 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 H7C0C1 242 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 APOL1O14791 398 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 MDM4O15151 490 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 COL6A2P12110 1019 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 TGM2P21980 687 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 LMO2P25791 158 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 ADORA2BP29275 332 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CRHR1P34998 444 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 PNPLA4P41247 253 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 STT3AP46977 705 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 ATP5OP48047 213 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 RPL34P49207 117 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CPT1AP50416 773 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CCR3P51677 355 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 BCAT1P54687 386 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 BASP1P80723 227 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CCL14Q16627 93 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CA9Q16790 459 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CES4AQ5XG92 561 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 SLC9A4Q6AI14 798 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 LIMS2Q7Z4I7 341 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 C7orf31Q8N865 590 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 PCDH19Q8TAB3 1148 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 EME1Q96AY2 570 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 TRIM56Q9BRZ2 755 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 C11orf84Q9BUA3 381 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 SNX25Q9H3E2 840 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CYP4F11Q9HBI6 524 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CCDC195A0A1B0GUA6 201 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 XPOTO43592 962 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 TFE3P19532 575 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 SCNN1AP37088 669 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 PTPN9P43378 593 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CRYBB1P53674 252 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 ESRRGP62508 458 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 BEX3Q00994 111 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 SOX4Q06945 474 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 ZNF618Q5T7W0 954 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 PDPK2PQ6A1A2 396 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 THOC7Q6I9Y2 204 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 C16orf89Q6UX73 402 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 SLC26A9Q7LBE3 791 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CLEC4CQ8WTT0 213 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CHPT1Q8WUD6 406 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 FAF2Q96CS3 445 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 PPP1R10Q96QC0 940 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 PNPLA3Q9NST1 481 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 GNPTGQ9UJJ9 305 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 CROTQ9UKG9 612 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 PCDHGB4Q9UN71 923 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 MYRFQ9Y2G1 1151 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 PCDHGB5Q9Y5G0 923 aa14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 GPC6Q9Y625 555 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-220ENST00000560998 ZNF487B1APH4 448 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 KBTBD13C9JR72 458 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 H3BNH8 94 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 TRDMT1O14717 391 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 KRT38O76015 456 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 ELK3P41970 407 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 TAF6P49848 677 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 BCAR1P56945 870 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 SEPT6Q14141 434 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 KCNJ11Q14654 390 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 C6orf52Q5T4I8 152 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 GPR180Q86V85 440 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 PPP1R14CQ8TAE6 165 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 TFB1MQ8WVM0 346 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 CENPIQ92674 756 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 RTP4Q96DX8 246 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 ZNF670Q9BS34 389 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 OSBPL11Q9BXB4 747 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 UNKQ9C0B0 810 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 AP5M1Q9H0R1 490 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 HIPK3Q9H422 1215 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 EPS15L1Q9UBC2 864 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 IPPQ9Y573 584 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 TEX264Q9Y6I9 313 aa14.21□□□□□ -0.13
RABGGTA-220ENST00000560998 PRSS51A0A1B0GVH4 220 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 C17orf102A2RUQ5 167 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 ADAM23O75077 832 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 RFPL1O75677 317 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 TRPA1O75762 1119 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 SORBS2O94875 1100 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 LCP1P13796 627 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 CDH3P22223 829 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 YWHAGP61981 247 aaKnown RBP eCLIP14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 INAQ16352 499 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 SV2CQ496J9 727 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 CST9Q5W186 159 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 DCLRE1AQ6PJP8 1040 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 GPR141Q7Z602 305 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 ARRDC4Q8NCT1 418 aa14.2□□□□□ -0.14
RABGGTA-220ENST00000560998 SMG8Q8ND04 991 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms