RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TDRD10Q5VZ19 366 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 EEF1DP3Q658K8 133 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 DHRS4L2Q6PKH6 230 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 PACS1Q6VY07 963 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 RBM44Q6ZP01 1051 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 RAPH1Q70E73 1250 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ZBTB33Q86T24 672 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 TTC30AQ86WT1 665 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ZDHHC17Q8IUH5 632 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 COLGALT2Q8IYK4 626 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 TRIML2Q8N7C3 387 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 FAM71DQ8N9W8 422 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 GOLM1Q8NBJ4 401 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 GSTCDQ8NEC7 633 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 GABPB2Q8TAK5 448 aaPredicted RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ZNF420Q8TAQ5 688 aaPredicted RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 DCUN1D1Q96GG9 259 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 FAR2Q96K12 515 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 GAS2L1Q99501 681 aaPredicted RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 OSMRQ99650 979 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 EBNA1BP2Q99848 306 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 TRIM56Q9BRZ2 755 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ZNF670Q9BS34 389 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 CNPY3Q9BT09 278 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 PRDM12Q9H4Q4 367 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 CYP3A43Q9HB55 503 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 MRM3Q9HC36 420 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 PCDH18Q9HCL0 1135 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 RAB6BQ9NRW1 208 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 TOPORSQ9NS56 1045 aaPredicted RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 PNPLA3Q9NST1 481 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 UTP6Q9NYH9 597 aaKnown RBP8.72□□□□□ -1.01
CCDC33-209ENST00000560565 DNAJC16Q9Y2G8 782 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 INSL6Q9Y581 213 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 ZDBF2Q9HCK1 2354 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 USP34Q70CQ2 3546 aa8.72□□□□□ -1.01
CCDC33-209ENST00000560565 CFAP47Q6ZTR5 3102 aa8.71□□□□□ -1.01
CCDC33-209ENST00000560565 A0A087WXM4 84 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 F8VP50 259 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ENPP3O14638 875 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 GPR182O15218 404 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 XPOTO43592 962 aaKnown RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 LRCH4O75427 683 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 GCATO75600 419 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ALDH1A2O94788 518 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 TMEM63AO94886 807 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 STAU1O95793 577 aaKnown RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PROCP04070 461 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PYGLP06737 847 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 RALBP11234 206 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 FGFR1P11362 822 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 COX4I1P13073 169 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ME2P23368 584 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 TPP2P29144 1249 aaPredicted RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 HMOX2P30519 316 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 HOXA11P31270 313 aaPredicted RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ATICP31939 592 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PPARGP37231 505 aaPredicted RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 CPA2P48052 419 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF143P52747 638 aaPredicted RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 AQP4P55087 323 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 BCAR1P56945 870 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 USP46P62068 366 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PSMC1P62191 440 aaKnown RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 YWHAZP63104 245 aaKnown RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 TRAP1Q12931 704 aaKnown RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 CCNIQ14094 377 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 SEPT6Q14141 434 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 FLOT2Q14254 428 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 LLGL1Q15334 1064 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PDCD4Q53EL6 469 aaKnown RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 SLC44A4Q53GD3 710 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ZBTB41Q5SVQ8 909 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 STEAP4Q687X5 459 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 KRT80Q6KB66 452 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 KLHDC10Q6PID8 442 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 TMC7Q7Z402 723 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 TTC7BQ86TV6 843 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 SATL1Q86VE3 508 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 CPNE8Q86YQ8 564 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 TREML1Q86YW5 311 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 DEFB107AQ8IZN7 70 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PGAM4Q8N0Y7 254 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 UBR7Q8N806 425 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 CNTD1Q8N815 330 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ZBTB8BQ8NAP8 495 aaPredicted RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PNPT1Q8TCS8 783 aaKnown RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF516Q92618 1163 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PBXIP1Q96AQ6 731 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 CFAP36Q96G28 342 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 CPNE1Q99829 537 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 FTHL17Q9BXU8 183 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 MRPL1Q9BYD6 325 aaKnown RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 YTHDF1Q9BYJ9 559 aaKnown RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 SDCBP2Q9H190 292 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 SMYD3Q9H7B4 428 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 VRTNQ9H8Y1 702 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 AGO3Q9H9G7 860 aaKnown RBP8.71□□□□□ -1.02
CCDC33-209ENST00000560565 EFCAB1Q9HAE3 211 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms