RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 LATS1O95835 1130 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 SKILP12757 684 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 CR2P20023 1033 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 MSNP26038 577 aaKnown RBP9.58□□□□□ -0.88
SMAD3-215ENST00000560424 CASP14P31944 242 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 KRT9P35527 623 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 CSKP41240 450 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 FMO5P49326 533 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 SKOR1P84550 965 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 LRMPQ12912 555 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 CDH18Q13634 790 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 TRIP4Q15650 581 aaPredicted RBP9.58□□□□□ -0.88
SMAD3-215ENST00000560424 EXOC3L4Q17RC7 722 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 C1orf220Q5T0J3 134 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 C9orf64Q5T6V5 341 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 GBP6Q6ZN66 633 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 KIAA0907Q7Z7F0 614 aaPredicted RBP9.58□□□□□ -0.88
SMAD3-215ENST00000560424 JAMLQ86YT9 394 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 AADATQ8N5Z0 425 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 ZNF397Q8NF99 534 aaPredicted RBP9.58□□□□□ -0.88
SMAD3-215ENST00000560424 TPCN2Q8NHX9 752 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 PARD3BQ8TEW8 1205 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 ARRDC3Q96B67 414 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 MYOCQ99972 504 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 DUSP16Q9BY84 665 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 KDM4CQ9H3R0 1056 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 LRRC4CQ9HCJ2 640 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 KLHL11Q9NVR0 708 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 NCKIPSDQ9NZQ3 722 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 CYTH4Q9UIA0 394 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 HBS1LQ9Y450 684 aaKnown RBP9.58□□□□□ -0.88
SMAD3-215ENST00000560424 ENTPD2Q9Y5L3 495 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 USP3Q9Y6I4 520 aa9.58□□□□□ -0.88
SMAD3-215ENST00000560424 UBR5O95071 2799 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-215ENST00000560424 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-215ENST00000560424 PES1O00541 588 aaKnown RBP9.57□□□□□ -0.88
SMAD3-215ENST00000560424 RIOK3O14730 519 aaKnown RBP9.57□□□□□ -0.88
SMAD3-215ENST00000560424 IRAK2O43187 625 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 SLC7A4O43246 635 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 RNGTTO60942 597 aaKnown RBP9.57□□□□□ -0.88
SMAD3-215ENST00000560424 TCEA3O75764 348 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 PIAS2O75928 621 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 SRPRAP08240 638 aaKnown RBP9.57□□□□□ -0.88
SMAD3-215ENST00000560424 ITGA2BP08514 1039 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 ITGB6P18564 788 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 TGM2P21980 687 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 PIK3CAP42336 1068 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 SLC11A2P49281 568 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 CETN1Q12798 172 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 ZNF177Q13360 481 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-215ENST00000560424 ELAVL3Q14576 367 aaKnown RBP9.57□□□□□ -0.88
SMAD3-215ENST00000560424 CDKN3Q16667 212 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 DCAF17Q5H9S7 520 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-215ENST00000560424 MPP7Q5T2T1 576 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 FAM46CQ5VWP2 391 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 DSG4Q86SJ6 1040 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 C14orf80Q86SX3 495 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 CLEC14AQ86T13 490 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 TMTC1Q8IUR5 882 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 STK40Q8N2I9 435 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 CARNMT1Q8N4J0 409 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 KDM1BQ8NB78 822 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 NEK11Q8NG66 645 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 TAF4BQ92750 862 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 TTC17Q96AE7 1141 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 BAG1Q99933 345 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-215ENST00000560424 SEMA3CQ99985 751 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 SLC25A18Q9H1K4 315 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 GANQ9H2C0 597 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 TMEM8AQ9HCN3 771 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 SPTLC3Q9NUV7 552 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 SFMBT1Q9UHJ3 866 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 ERVW-1Q9UQF0 538 aa9.57□□□□□ -0.88
SMAD3-215ENST00000560424 CCDC187A0A096LP49 1063 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 LRRIQ3A6PVS8 624 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-215ENST00000560424 TTC34A8MYJ7 566 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 C1QTNF3-AMACRE9PGA6 284 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 H3BM21 787 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 SCAMP1O15126 338 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 EFSO43281 561 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 PLRG1O43660 514 aaKnown RBP9.56□□□□□ -0.88
SMAD3-215ENST00000560424 LZTS3O60299 673 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-215ENST00000560424 RTN2O75298 545 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 CD58P19256 250 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 PON1P27169 355 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 MZF1P28698 734 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-215ENST00000560424 AKT2P31751 481 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 ADKP55263 362 aaKnown RBP9.56□□□□□ -0.88
SMAD3-215ENST00000560424 HNRNPKP61978 463 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMAD3-215ENST00000560424 SPIDRQ14159 915 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 CBWD6Q4V339 395 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 CBWD3Q5JTY5 395 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 CBWD5Q5RIA9 395 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 MANEAQ5SRI9 462 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 PPP1R26Q5T8A7 1209 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-215ENST00000560424 KLHDC7AQ5VTJ3 777 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 TCERG1LQ5VWI1 586 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 KRT39Q6A163 491 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 SPOPLQ6IQ16 392 aa9.56□□□□□ -0.88
SMAD3-215ENST00000560424 ZCCHC8Q6NZY4 707 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms