RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 GPR27Q9NS67 375 aa10.59□□□□□ -0.71
APH1B-208ENST00000560353 IPO11Q9UI26 975 aaKnown RBP10.59□□□□□ -0.71
APH1B-208ENST00000560353 LOXL2Q9Y4K0 774 aa10.59□□□□□ -0.71
APH1B-208ENST00000560353 PRRC2CQ9Y520 2896 aaKnown RBP10.59□□□□□ -0.71
APH1B-208ENST00000560353 RP1L1Q8IWN7 2480 aaPredicted RBP10.58□□□□□ -0.72
APH1B-208ENST00000560353 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.58□□□□□ -0.72
APH1B-208ENST00000560353 D6RAR5 112 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 CLIC2O15247 247 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 ALOX15BO15296 676 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 EIF3DO15371 548 aaKnown RBP eCLIP10.58□□□□□ -0.72
APH1B-208ENST00000560353 TGFB1I1O43294 461 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 MTSS1O43312 755 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 ACSL4O60488 711 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 ASS1P00966 412 aaKnown RBP10.58□□□□□ -0.72
APH1B-208ENST00000560353 VAV1P15498 845 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 ZNF18P17022 549 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 JUNDP17535 347 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 NOS2P35228 1153 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 TXLNAP40222 546 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 CASP4P49662 377 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 STK19P49842 368 aaPredicted RBP10.58□□□□□ -0.72
APH1B-208ENST00000560353 RPS24P62847 133 aaKnown RBP10.58□□□□□ -0.72
APH1B-208ENST00000560353 SULT2A1Q06520 285 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 PPP1R26Q5T8A7 1209 aaPredicted RBP10.58□□□□□ -0.72
APH1B-208ENST00000560353 TMEM164Q5U3C3 297 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 BSPRYQ5W0U4 402 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 ZNF787Q6DD87 383 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 OR6B2Q6IFH4 312 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 MMS22LQ6ZRQ5 1243 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 PIGZQ86VD9 579 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 ZNF507Q8TCN5 953 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 EDEM1Q92611 657 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 B3GNT4Q9C0J1 378 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 CYP3A43Q9HB55 503 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 CUEDC1Q9NWM3 386 aaPredicted RBP10.58□□□□□ -0.72
APH1B-208ENST00000560353 SPASTQ9UBP0 616 aa10.58□□□□□ -0.72
APH1B-208ENST00000560353 TDRD6O60522 2096 aaKnown RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 ZFC3H1O60293 1989 aaKnown RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 CSMD1Q96PZ7 3565 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 LMO7DNF2Z398 122 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 MCF2LO15068 1137 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 MSI1O43347 362 aaKnown RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 ACTN4O43707 911 aaKnown RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 EXOC3O60645 756 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 VPS4BO75351 444 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 LUC7L3O95232 432 aaKnown RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 IGLV3-27P01718 113 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 DCTP40126 519 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 RABIFP47224 123 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 ATP1A2P50993 1020 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 KLRB1Q12918 225 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 SLC12A1Q13621 1099 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 PIP5KL1Q5T9C9 394 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 KYAT3Q6YP21 454 aaKnown RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 CCDC73Q6ZRK6 1079 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 EPM2AIP1Q7L775 607 aaPredicted RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 APCDD1Q8J025 514 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 PARD3BQ8TEW8 1205 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 FRS2Q8WU20 508 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 NDRG1Q92597 394 aaKnown RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 USP7Q93009 1102 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 BMFQ96LC9 184 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 HEXIM2Q96MH2 286 aaKnown RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 PRICKLE1Q96MT3 831 aaPredicted RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 IPO9Q96P70 1041 aaKnown RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 CMKLR1Q99788 373 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 ULBP1Q9BZM6 244 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 ABCC13Q9NSE7 274 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 FOXJ2Q9P0K8 574 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 CGNQ9P2M7 1197 aaKnown RBP10.57□□□□□ -0.72
APH1B-208ENST00000560353 KLF15Q9UIH9 416 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 VPS4AQ9UN37 437 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 PDZD2O15018 2839 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 LRRK1Q38SD2 2015 aa10.57□□□□□ -0.72
APH1B-208ENST00000560353 A0A087X0B3 334 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 A1L4Q6 167 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 LRRIQ3A6PVS8 624 aaPredicted RBP10.56□□□□□ -0.72
APH1B-208ENST00000560353 STMND1H3BQB6 276 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 H3BQV1 296 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 PCDH8O95206 1070 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 ANXA6P08133 673 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 KRT7P08729 469 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 ITIH1P19827 911 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 ADKP55263 362 aaKnown RBP10.56□□□□□ -0.72
APH1B-208ENST00000560353 ZACNQ401N2 412 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 ACCSLQ4AC99 568 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 LACTB2Q53H82 288 aaPredicted RBP10.56□□□□□ -0.72
APH1B-208ENST00000560353 NADSYN1Q6IA69 706 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 CAPRIN2Q6IMN6 1127 aaKnown RBP10.56□□□□□ -0.72
APH1B-208ENST00000560353 SPOPLQ6IQ16 392 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 BHLHA9Q7RTU4 235 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 C12orf56Q8IXR9 622 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 CFAP52Q8N1V2 620 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 PLEKHO2Q8TD55 490 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 GPBAR1Q8TDU6 330 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 PPP1R13BQ96KQ4 1090 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 ZNF768Q9H5H4 540 aaKnown RBP10.56□□□□□ -0.72
APH1B-208ENST00000560353 TFIP11Q9UBB9 837 aaKnown RBP10.56□□□□□ -0.72
APH1B-208ENST00000560353 RP1P56715 2156 aa10.56□□□□□ -0.72
APH1B-208ENST00000560353 POM121BA6NF01 834 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms