RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 RABGGTBP53611 331 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 AQP5P55064 265 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 MLLT6P55198 1093 aaPredicted RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 ABCE1P61221 599 aaKnown RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 RPL10AP62906 217 aaKnown RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 TNK2Q07912 1038 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 ASPHQ12797 758 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 E2F5Q15329 346 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 NOMO2Q5JPE7 1267 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 FAM182AQ5T1J6 154 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 CERCAMQ5T4B2 595 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 ARTNQ5T4W7 220 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 KIAA0930Q6ICG6 404 aaPredicted RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 FSTL4Q6MZW2 842 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 RWDD4Q6NW29 188 aaKnown RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 PKN3Q6P5Z2 889 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 TLDC1Q6P9B6 456 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 SLC24A5Q71RS6 500 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 RNF180Q86T96 592 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 MON1AQ86VX9 555 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 COLGALT2Q8IYK4 626 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 NUP93Q8N1F7 819 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 UMODL1-AS1Q8N2C9 162 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 TEX9Q8N6V9 391 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 NETO2Q8NC67 525 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 PPHLN1Q8NEY8 458 aaKnown RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 MCUR1Q96AQ8 359 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 SLC39A13Q96H72 371 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 VPS39Q96JC1 886 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 TSNARE1Q96NA8 513 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 RANBP9Q96S59 729 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 TMEM209Q96SK2 561 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 MIPEPQ99797 713 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 CCDC106Q9BWC9 280 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 FTHL17Q9BXU8 183 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 SEZ6LQ9BYH1 1024 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 NMUR2Q9GZQ4 415 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.23□□□□□ -1.099e-6■■□□□ 13.2
SMAD3-212ENST00000559937 ARNT2Q9HBZ2 717 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 OLA1Q9NTK5 396 aaKnown RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 C20orf96Q9NUD7 363 aaPredicted RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 TAS2R1Q9NYW7 299 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 TMEM216Q9P0N5 145 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 SLC17A6Q9P2U8 582 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 PPARGC1AQ9UBK2 798 aaKnown RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 APOBEC2Q9Y235 224 aaKnown RBP8.23□□□□□ -1.09
SMAD3-212ENST00000559937 TLR6Q9Y2C9 796 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 DNAJC16Q9Y2G8 782 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 INPP5FQ9Y2H2 1132 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 SNX10Q9Y5X0 201 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 CDY1Q9Y6F8 540 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 GBF1Q92538 1859 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 TANC1Q9C0D5 1861 aa8.23□□□□□ -1.09
SMAD3-212ENST00000559937 TTC3P53804 2025 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 A0A096LPK6 155 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 FAM92AA1XBS5 289 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 OR6C75A6NL08 312 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 E9PAM4 449 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 DFFAO00273 331 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 ATP9BO43861 1147 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 USP12O75317 370 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 RTN3O95197 1032 aaPredicted RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 ANP32DO95626 131 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 TPBGLP0DKB5 382 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 RHOQP17081 205 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 PAMP19021 973 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 GNAZP19086 355 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 CCND3P30281 292 aaPredicted RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 ADRA1AP35348 466 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 PSEN1P49768 467 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 KPNA2P52292 529 aaKnown RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 ACLYP53396 1101 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 PRKCZQ05513 592 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 SMARCB1Q12824 385 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 TUBB3Q13509 450 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 TSNAXIP1Q2TAA8 658 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 HSF5Q4G112 596 aaPredicted RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 PAN2Q504Q3 1202 aaKnown RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 HSP90AA5PQ58FG0 334 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 RABGAP1LQ5R372 815 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 MAP3K21Q5TCX8 1036 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 C16orf46Q6P387 395 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 CES3Q6UWW8 571 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 RINLQ6ZS11 566 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 KIAA0408Q6ZU52 694 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 CTU1Q7Z7A3 348 aaKnown RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 GALNT7Q86SF2 657 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 ZC3HC1Q86WB0 502 aaKnown RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 ATP6V0D2Q8N8Y2 350 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 SLC43A3Q8NBI5 491 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 SCAMP5Q8TAC9 235 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 CASP10Q92851 521 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 RSRC1Q96IZ7 334 aaKnown RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 CELF6Q96J87 481 aaKnown RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 FCRL2Q96LA5 508 aaPredicted RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 ZNF778Q96MU6 729 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 RILPQ96NA2 401 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 NUDCD1Q96RS6 583 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 SORT1Q99523 831 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms