RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 F9P00740 461 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 PROS1P07225 676 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TBC1D3HP0C7X1 549 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 ZNF883P0CG24 379 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 RFC1P35251 1148 aaPredicted RBP18.16■□□□□ 0.5
HDDC3-205ENST00000559898 HDAC4P56524 1084 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 ARF5P84085 180 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 ZNF423Q2M1K9 1284 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 ANO6Q4KMQ2 910 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 CCDC183Q5T5S1 534 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 MANEALQ5VSG8 457 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TBC1D3GQ6DHY5 549 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TBC1D3CQ6IPX1 549 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 LEKR1Q6ZMV7 388 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TBC1D3Q8IZP1 549 aaPredicted RBP18.16■□□□□ 0.5
HDDC3-205ENST00000559898 PYROXD2Q8N2H3 581 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 ATP11CQ8NB49 1132 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 NETO2Q8NC67 525 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 NEK11Q8NG66 645 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 KLK6Q92876 244 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 ERGIC2Q96RQ1 377 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 HAPLN3Q96S86 360 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 SPON2Q9BUD6 331 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TAS2R14Q9NYV8 317 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 PCDHB9Q9Y5E1 797 aa18.16■□□□□ 0.5
HDDC3-205ENST00000559898 TCRBV5S1A1TA0A578 114 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 LRRC10BA6NIK2 292 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 PLRG1O43660 514 aaKnown RBP18.15■□□□□ 0.5
HDDC3-205ENST00000559898 OR1E1P30953 314 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 ADRA1BP35368 520 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 CCR5P51681 352 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 OXCT1P55809 520 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 RACK1P63244 317 aaKnown RBP18.15■□□□□ 0.5
HDDC3-205ENST00000559898 TEAD4Q15561 434 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 PIP5KL1Q5T9C9 394 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 IL27RAQ6UWB1 636 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 ADAT2Q7Z6V5 191 aaKnown RBP18.15■□□□□ 0.5
HDDC3-205ENST00000559898 SETD3Q86TU7 594 aaPredicted RBP18.15■□□□□ 0.5
HDDC3-205ENST00000559898 RHBDD1Q8TEB9 315 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 VOPP1Q96AW1 172 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 SERAC1Q96JX3 654 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 MYOCQ99972 504 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 AASDHPPTQ9NRN7 309 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 ADAM22Q9P0K1 906 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 ZMIZ1Q9ULJ6 1067 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 FCF1Q9Y324 198 aaKnown RBP18.15■□□□□ 0.5
HDDC3-205ENST00000559898 ZZEF1O43149 2961 aa18.15■□□□□ 0.5
HDDC3-205ENST00000559898 VILLO15195 856 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 LATO43561 262 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 CDK11BP21127 795 aaKnown RBP18.14■□□□□ 0.49
HDDC3-205ENST00000559898 GKP32189 559 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 CHRNA3P32297 505 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 E4F1Q66K89 784 aaPredicted RBP18.14■□□□□ 0.49
HDDC3-205ENST00000559898 C22orf39Q6P5X5 142 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 WDR59Q6PJI9 974 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 LRRC31Q6UY01 552 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 DPY19L3Q6ZPD9 716 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 MON1BQ7L1V2 547 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 ARCQ7LC44 396 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 NLRP14Q86W24 1093 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 SPATS2Q86XZ4 545 aaKnown RBP18.14■□□□□ 0.49
HDDC3-205ENST00000559898 DCAF4L2Q8NA75 395 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 GRIN3AQ8TCU5 1115 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 FAM172AQ8WUF8 416 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 CENPIQ92674 756 aaPredicted RBP18.14■□□□□ 0.49
HDDC3-205ENST00000559898 AGPAT1Q99943 283 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 ZYG11BQ9C0D3 744 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 SEPT11Q9NVA2 429 aaKnown RBP18.14■□□□□ 0.49
HDDC3-205ENST00000559898 OR12D3Q9UGF7 316 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 DNAI1Q9UI46 699 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 NEUROG3Q9Y4Z2 214 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 CFAP47Q6ZTR5 3102 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 IGF2RP11717 2491 aa18.14■□□□□ 0.49
HDDC3-205ENST00000559898 A0A1B0GTQ1 180 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 CCP110O43303 1012 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 TPM2P07951 284 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 CD38P28907 300 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 SDC4P31431 198 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 CLDN6P56747 220 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 RPL7AP62424 266 aaKnown RBP18.13■□□□□ 0.49
HDDC3-205ENST00000559898 KRT83P78385 493 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 OGDHQ02218 1023 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 GNA12Q03113 381 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 BNIP3Q12983 259 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 ARSIQ5FYB1 569 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 PHF13Q86YI8 300 aaPredicted RBP18.13■□□□□ 0.49
HDDC3-205ENST00000559898 MSANTD4Q8NCY6 345 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 BAP1Q92560 729 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 SYT11Q9BT88 431 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 C2orf49Q9BVC5 232 aaPredicted RBP18.13■□□□□ 0.49
HDDC3-205ENST00000559898 ACE2Q9BYF1 805 aaPredicted RBP18.13■□□□□ 0.49
HDDC3-205ENST00000559898 KLC2Q9H0B6 622 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 ATP13A1Q9HD20 1204 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 FZD3Q9NPG1 666 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 MSRB2Q9Y3D2 182 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 PCDHGB2Q9Y5G2 931 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 WASF2Q9Y6W5 498 aa18.13■□□□□ 0.49
HDDC3-205ENST00000559898 ILVBLA1L0T0 632 aa18.12■□□□□ 0.49
HDDC3-205ENST00000559898 KPNA3O00505 521 aaPredicted RBP18.12■□□□□ 0.49
HDDC3-205ENST00000559898 LRIG2O94898 1065 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms