RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 POLE2P56282 527 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 LTBQ06643 244 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 TRIM60Q495X7 471 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 OTUD1Q5VV17 481 aaPredicted RBP4.07□□□□□ -1.76
SPG11-218ENST00000559754 AAGABQ6PD74 315 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 SLC16A12Q6ZSM3 486 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 RTL10Q7L3V2 364 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 ANKS1BQ7Z6G8 1248 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 GPSM1Q86YR5 675 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 CACNA2D3Q8IZS8 1091 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 ENDOVQ8N8Q3 282 aaKnown RBP4.07□□□□□ -1.76
SPG11-218ENST00000559754 GABPB2Q8TAK5 448 aaPredicted RBP4.07□□□□□ -1.76
SPG11-218ENST00000559754 MED30Q96HR3 178 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 SEC62Q99442 399 aaKnown RBP4.07□□□□□ -1.76
SPG11-218ENST00000559754 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 DCLK3Q9C098 648 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 PLAC1Q9HBJ0 212 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 CNTN6Q9UQ52 1028 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 TMEM98Q9Y2Y6 226 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 INSL5Q9Y5Q6 135 aa4.07□□□□□ -1.76
SPG11-218ENST00000559754 SPRY3O43610 288 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 FGF3P11487 239 aaPredicted RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 HOXB9P17482 250 aaPredicted RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 PDIA3P30101 505 aaKnown RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 HOXD3P31249 432 aaPredicted RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 PCP4P48539 62 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 CDK7P50613 346 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 RCAN1P53805 252 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 FAM3BP58499 235 aaPredicted RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 MPP1Q00013 466 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 RHAGQ02094 409 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 FOXO1Q12778 655 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 G3BP1Q13283 466 aaKnown RBP eCLIP4.06□□□□□ -1.76
SPG11-218ENST00000559754 PTK2BQ14289 1009 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 GPR18Q14330 331 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 ZNF324BQ6AW86 544 aaPredicted RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 FAAH2Q6GMR7 532 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 CAPRIN2Q6IMN6 1127 aaKnown RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 Q6ZTK2 550 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 TRILQ7L0X0 811 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 CTU1Q7Z7A3 348 aaKnown RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 TMEM200AQ86VY9 491 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 FAM217AQ8IXS0 508 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 DPP10Q8N608 796 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 FAM71BQ8TC56 605 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 IP6K1Q92551 441 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 NEUROG1Q92886 237 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 PHF21BQ96EK2 531 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 FAM84BQ96KN1 310 aaPredicted RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 ZSCAN31Q96LW9 406 aaPredicted RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 NPAS1Q99742 590 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 MECRQ9BV79 373 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 SORBS1Q9BX66 1292 aaKnown RBP4.06□□□□□ -1.76
SPG11-218ENST00000559754 SEZ6LQ9BYH1 1024 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 VPS33BQ9H267 617 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 CD93Q9NPY3 652 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 ICKQ9UPZ9 632 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 CRYL1Q9Y2S2 319 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 SLC45A1Q9Y2W3 748 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 PKP3Q9Y446 797 aa4.06□□□□□ -1.76
SPG11-218ENST00000559754 RRN3P2A6NIE6 340 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 K7ENM7 598 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 EYA2O00167 538 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 IRAK2O43187 625 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 BAIAP3O94812 1187 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 HLA-DQA2P01906 255 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 PEPDP12955 493 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 CAPN3P20807 821 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 TNFRSF8P28908 595 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 ZP1P60852 638 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 DSC1Q08554 894 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 PRKG1Q13976 671 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 SPARCL1Q14515 664 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 TAF12Q16514 161 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 ZACNQ401N2 412 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 ARL13AQ5H913 290 aaPredicted RBP4.05□□□□□ -1.76
SPG11-218ENST00000559754 VWA5B1Q5TIE3 1220 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 CCDC25Q86WR0 208 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 DCP1BQ8IZD4 617 aaKnown RBP4.05□□□□□ -1.76
SPG11-218ENST00000559754 CADM3Q8N126 398 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 BICD2Q8TD16 824 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 CLEC4CQ8WTT0 213 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 NUDCD2Q8WVJ2 157 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 HDAC2Q92769 488 aaKnown RBP4.05□□□□□ -1.76
SPG11-218ENST00000559754 URB1-AS1Q96HZ7 61 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 SERINC2Q96SA4 455 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 RMDN3Q96TC7 470 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 SLC26A6Q9BXS9 759 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 B3GNT4Q9C0J1 378 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 MAGEH1Q9H213 219 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 CATSPERBQ9H7T0 1116 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 ACTR5Q9H9F9 607 aaPredicted RBP4.05□□□□□ -1.76
SPG11-218ENST00000559754 ZNF304Q9HCX3 659 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 ITM2CQ9NQX7 267 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 ARL15Q9NXU5 204 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 FBXO4Q9UKT5 387 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 FZD10Q9ULW2 581 aa4.05□□□□□ -1.76
SPG11-218ENST00000559754 TRBV5-7A0A0A0MS05 114 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 FAM90A18PA6NE21 464 aa4.04□□□□□ -1.76
SPG11-218ENST00000559754 TMEM247A6NEH6 219 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms