RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 HNRNPH3P31942 346 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 ACSL1P33121 698 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 PCK1P35558 622 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 ARL4AP40617 200 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 SSR1P43307 286 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 PSMD8P48556 350 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 SERPINH1P50454 418 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 DNA2P51530 1060 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 IRAK1P51617 712 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 AFF3P51826 1226 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 LIMK1P53667 647 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 YBEYP58557 167 aaPredicted RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 TPI1P60174 286 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 SNRPD1P62314 119 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 IRX4P78413 519 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 RAD51Q06609 339 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TEAD4Q15561 434 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 SLC18A3Q16572 532 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 HADHQ16836 314 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 PARP15Q460N3 678 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 BOLA3Q53S33 107 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 ODF2Q5BJF6 829 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 PPP6R3Q5H9R7 873 aaPredicted RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 CCDC122Q5T0U0 273 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 DCAF12L1Q5VU92 463 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 E4F1Q66K89 784 aaPredicted RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 HGSNATQ68CP4 663 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D3GQ6DHY5 549 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D3CQ6IPX1 549 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 IL27RAQ6UWB1 636 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 LINGO4Q6UY18 593 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 Q6ZVU0 165 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 H2AFVQ71UI9 128 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 ADAT2Q7Z6V5 191 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 VSTM4Q8IW00 320 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 ZNF683Q8IZ20 524 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TBC1D3Q8IZP1 549 aaPredicted RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 STK40Q8N2I9 435 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 RYBPQ8N488 228 aaPredicted RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 HDDC3Q8N4P3 179 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 SH2D3CQ8N5H7 860 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 LZTR1Q8N653 840 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 PCDH20Q8N6Y1 951 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 CCDC185Q8N715 623 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 RTL3Q8N8U3 475 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 OR52K2Q8NGK3 314 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 FRS2Q8WU20 508 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 CASKIN2Q8WXE0 1202 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 DNASE2BQ8WZ79 361 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 ALG14Q96F25 216 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 MYO19Q96H55 970 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 EDEM2Q9BV94 578 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 NUP85Q9BW27 656 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 GTPBP2Q9BX10 602 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 ZDHHC5Q9C0B5 715 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 THAP2Q9H0W7 228 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 NEUROG2Q9H2A3 272 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 PABPC3Q9H361 631 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 KDM4CQ9H3R0 1056 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 DHX35Q9H5Z1 703 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 LUC7LQ9NQ29 371 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 TMEM9BQ9NQ34 198 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 SCUBE2Q9NQ36 999 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TMPRSS4Q9NRS4 437 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 ABHD10Q9NUJ1 306 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 TMEM74BQ9NUR3 256 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 DLL3Q9NYJ7 618 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 CTTNBP2NLQ9P2B4 639 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 IL36AQ9UHA7 158 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 PCSK1NQ9UHG2 260 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 IP6K2Q9UHH9 426 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 EIF2B4Q9UI10 523 aaKnown RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 VPS51Q9UID3 782 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 ANAPC7Q9UJX3 599 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 PPM1HQ9ULR3 514 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 FZD10Q9ULW2 581 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 SLC6A14Q9UN76 642 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 AP4E1Q9UPM8 1137 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.47□□□□□ -1.69
SNX1-205ENST00000559339 OR51B4Q9Y5P0 310 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 SNX10Q9Y5X0 201 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 WDR87Q6ZQQ6 2873 aa4.47□□□□□ -1.69
SNX1-205ENST00000559339 ATXN2Q99700 1313 aaKnown RBP4.46□□□□□ -1.69
SNX1-205ENST00000559339 MYO18AQ92614 2054 aaKnown RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 DCDC2BA2VCK2 349 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 C2orf72A6NCS6 295 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ARHGAP42A6NI28 874 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 C4orf47A7E2U8 309 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 WASH4PA8MWX3 477 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 FAM72CH0Y354 149 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 H3BRJ5 948 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 EEF2KO00418 725 aaKnown RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 KPNA3O00505 521 aaPredicted RBP4.46□□□□□ -1.7
SNX1-205ENST00000559339 NEMP1O14524 444 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 ARHGAP33O14559 1287 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 GDF9O60383 454 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 DFNA5O60443 496 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 SNAP91O60641 907 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 OPHN1O60890 802 aa4.46□□□□□ -1.7
SNX1-205ENST00000559339 LRCH4O75427 683 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms