RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 FAM47EQ6ZV65 393 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 USP51Q70EK9 711 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 MOB3CQ70IA8 216 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 SLC29A4Q7RTT9 530 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ZNF804AQ7Z570 1209 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ANKRD23Q86SG2 305 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PEG10Q86TG7 708 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 GPAT4Q86UL3 456 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 VSIG1Q86XK7 387 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 KLBQ86Z14 1044 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 LAS2Q8IYD9 372 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ULK2Q8IYT8 1036 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ADGRF3Q8IZF5 1079 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CPXM2Q8N436 756 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PLD5Q8N7P1 536 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 SCAIQ8N9R8 606 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 KCTD6Q8NC69 237 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 TMEM116Q8NCL8 245 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 C11orf65Q8NCR3 313 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 APPL2Q8NEU8 664 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PROKR1Q8TCW9 393 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 EXTL1Q92935 676 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ARHGEF2Q92974 986 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 GTF3C6Q969F1 213 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CAVIN3Q969G5 261 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 FAM149B1Q96BN6 582 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 SAT2Q96F10 170 aaPredicted RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 EDC3Q96F86 508 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PERPQ96FX8 193 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 BBS4Q96RK4 519 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 NPAS1Q99742 590 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 NCAPGQ9BPX3 1015 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CLSTN3Q9BQT9 956 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 BDH2Q9BUT1 245 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 RNF26Q9BY78 433 aaPredicted RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 WDR11Q9BZH6 1224 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 KLC2Q9H0B6 622 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 RSPH9Q9H1X1 276 aaPredicted RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 FBRSL1Q9HCM7 1045 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ZCCHC17Q9NP64 241 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 ENTPD7Q9NQZ7 604 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PLSCR4Q9NRQ2 329 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 DLL3Q9NYJ7 618 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CPSF2Q9P2I0 782 aaKnown RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 CTNNAL1Q9UBT7 734 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 FBXO4Q9UKT5 387 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 FZD4Q9ULV1 537 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 PKP3Q9Y446 797 aa2.45□□□□□ -2.02
GABPB1-209ENST00000559100 SIRT4Q9Y6E7 314 aaPredicted RBP2.45□□□□□ -2.02
GABPB1-209ENST00000559100 RUSC2Q8N2Y8 1516 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 C17orf113A0A1B0GUU1 675 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 CCDC151A5D8V7 595 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 TMEM200CA6NKL6 621 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 LINC00473A8K010 186 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 AGAP14A8MT82 685 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 K7ESM1 405 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 CTDSP2O14595 271 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 PRYO14603 147 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 TGFB1I1O43294 461 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 MSI1O43347 362 aaKnown RBP2.44□□□□□ -2.02
GABPB1-209ENST00000559100 TBCAO75347 108 aaKnown RBP2.44□□□□□ -2.02
GABPB1-209ENST00000559100 SEC31AO94979 1220 aaKnown RBP2.44□□□□□ -2.02
GABPB1-209ENST00000559100 MT-CO3P00414 261 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 ADAP00813 363 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 MBPP02686 304 aaPredicted RBP2.44□□□□□ -2.02
GABPB1-209ENST00000559100 RB1P06400 928 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 HSP90AB1P08238 724 aaKnown RBP2.44□□□□□ -2.02
GABPB1-209ENST00000559100 ADH4P08319 380 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 C1SP09871 688 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 FCGR2AP12318 317 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 APEHP13798 732 aaKnown RBP2.44□□□□□ -2.02
GABPB1-209ENST00000559100 AKR1A1P14550 325 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 SLC2A4P14672 509 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 ZNF8P17098 575 aaPredicted RBP2.44□□□□□ -2.02
GABPB1-209ENST00000559100 IGFBP2P18065 325 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 TGM2P21980 687 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 NR4A1P22736 598 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 MCCP23508 829 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 GJC1P36383 396 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 PSMB10P40306 273 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 PIK3CAP42336 1068 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 CLK3P49761 638 aaKnown RBP2.44□□□□□ -2.02
GABPB1-209ENST00000559100 GNAQP50148 359 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 RRP1P56182 461 aaKnown RBP2.44□□□□□ -2.02
GABPB1-209ENST00000559100 ZBED6P86452 979 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 MTA1Q13330 715 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 GAB1Q13480 694 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 RUNX2Q13950 521 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 GALNT3Q14435 633 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 PTPAQ15257 358 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 TAF11Q15544 211 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 NTRK2Q16620 822 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 FBXO43Q4G163 708 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 RNASE12Q5GAN4 147 aaKnown RBP2.44□□□□□ -2.02
GABPB1-209ENST00000559100 LY6G5CQ5SRR4 150 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 C10orf76Q5T2E6 689 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 TMEM63BQ5T3F8 832 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 LRCH2Q5VUJ6 765 aa2.44□□□□□ -2.02
GABPB1-209ENST00000559100 TMEM268Q5VZI3 342 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms