RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 FUT11Q495W5 492 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 EFHC1Q5JVL4 640 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 TREML2Q5T2D2 321 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ANKS6Q68DC2 871 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 PDXDC1Q6P996 788 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 GJB7Q6PEY0 223 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 SLC22A25Q6T423 547 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 LRRC55Q6ZSA7 311 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 Q6ZWC4 215 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 PRSS45Q7RTY3 260 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 PRRT2Q7Z6L0 340 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ARID3BQ8IVW6 561 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 OR4N4Q8N0Y3 316 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 TMEM163Q8TC26 289 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 RAB40AQ8WXH6 277 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 LPIN2Q92539 896 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 CAVIN3Q969G5 261 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ZUFSPQ96AP4 578 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 KLHL29Q96CT2 875 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 FAM120BQ96EK7 910 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 VCPIP1Q96JH7 1222 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ZNF570Q96NI8 536 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 TIMP4Q99727 224 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 MYOCQ99972 504 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 IFT27Q9BW83 186 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 PITPNM3Q9BZ71 974 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 MEGF9Q9H1U4 602 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 USP29Q9HBJ7 922 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ARL8BQ9NVJ2 186 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 PPP4R1LQ9P1A2 415 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 SLC25A10Q9UBX3 287 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 ZNF70Q9UC06 446 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 LEF1Q9UJU2 399 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 DNAJC16Q9Y2G8 782 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 TSC22D4Q9Y3Q8 395 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 MAU2Q9Y6X3 613 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 GOLGB1Q14789 3259 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 POLR1AO95602 1720 aaPredicted RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 DEPDC5O75140 1603 aa1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 DNMT1P26358 1616 aaKnown RBP1.44□□□□□ -2.18
CTDSPL2-202ENST00000558373 MAST3O60307 1309 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 KDM3AQ9Y4C1 1321 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 PDZD2O15018 2839 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 RPP40O75818 363 aaKnown RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 IPO7O95373 1038 aaKnown RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 CD4P01730 458 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 NR2F6P10588 404 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 UBL4AP11441 157 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 EPHB2P29323 1055 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 HOXC9P31274 260 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 CPA2P48052 419 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 POLD2P49005 469 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 CLK3P49761 638 aaKnown RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 SCNN1GP51170 649 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 OLR1P78380 273 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 BOP1Q14137 746 aaKnown RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 NEDD9Q14511 834 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 GEN1Q17RS7 908 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 FAM214AQ32MH5 1076 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 GALNTL6Q49A17 601 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 SLC9A4Q6AI14 798 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 MSANTD2Q6P1R3 559 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 TMED8Q6PL24 325 aaPredicted RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 SERPINA13PQ6UXR4 307 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 DNAAF5Q86Y56 855 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 CPOQ8IVL8 374 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 MAML2Q8IZL2 1156 aaPredicted RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 SCAMP5Q8TAC9 235 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 RAB24Q969Q5 203 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 ERLEC1Q96DZ1 483 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 UROC1Q96N76 676 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 SLITRK1Q96PX8 696 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 SMC6Q96SB8 1091 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 GPR20Q99678 358 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 CITED2Q99967 270 aaPredicted RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 ADPGKQ9BRR6 497 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 THAP7Q9BT49 309 aaPredicted RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 GHITMQ9H3K2 345 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 MAGIXQ9H6Y5 334 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 ACAD9Q9H845 621 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 MRPL15Q9P015 296 aaKnown RBP1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 AMACRQ9UHK6 382 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 RASAL2Q9UJF2 1139 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 SERTAD3Q9UJW9 196 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 DAPP1Q9UN19 280 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 A4GNTQ9UNA3 340 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 WNT6Q9Y6F9 365 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 ADGRA2Q96PE1 1338 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 GOLGA6L9A6NEM1 432 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 F8W810 466 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 HCRTR2O43614 444 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 NDUFB4O95168 129 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 MT-CO3P00414 261 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 ADH4P08319 380 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 MYL6BP14649 208 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 GPD1P21695 349 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 CNTFP26441 200 aa1.43□□□□□ -2.18
CTDSPL2-202ENST00000558373 CERS1P27544 350 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms