RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 VAPBO95292 243 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 CCNCP24863 283 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 CNTFP26441 200 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 ATN1P54259 1190 aaPredicted RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 ALDH18A1P54886 795 aaKnown RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 COG7P83436 770 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 MPP1Q00013 466 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 DUSP4Q13115 394 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 CTBP1Q13363 440 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 C10orf120Q5SQS8 335 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 RASIP1Q5U651 963 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 MBLAC2Q68D91 279 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 NAPEPLDQ6IQ20 393 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 ESRP1Q6NXG1 681 aaKnown RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 CYS1Q717R9 158 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 MON1AQ86VX9 555 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 LONP2Q86WA8 852 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 CRLF3Q8IUI8 442 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 SCML4Q8N228 414 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 AGAP11Q8TF27 550 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 SKA1Q96BD8 255 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 HMCESQ96FZ2 354 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 VAT1Q99536 393 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 FSD1LQ9BXM9 530 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 CCSER2Q9H7U1 834 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 NT5MQ9NPB1 228 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 MARCH5Q9NX47 278 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 MKS1Q9NXB0 559 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 PPARGC1AQ9UBK2 798 aaKnown RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 IPO11Q9UI26 975 aaKnown RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 SCML2Q9UQR0 700 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 HBS1LQ9Y450 684 aaKnown RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 PCDHB7Q9Y5E2 793 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 VWA8A3KMH1 1905 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 CASP8AP2Q9UKL3 1982 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 A0A096LPK6 155 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 ARHGEF37A1IGU5 675 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 ARVCFO00192 962 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 CCL22O00626 93 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 PQBP1O60828 265 aaKnown RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 FGF3P11487 239 aaPredicted RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 GLRBP48167 497 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 LIMK2P53671 638 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 MLLT6P55198 1093 aaPredicted RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 CCL23P55773 120 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 FAM189BP81408 668 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 ITGA9Q13797 1035 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 RCN2Q14257 317 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 GRM3Q14832 879 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 MS4A13Q5J8X5 152 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 GRTP1Q5TC63 336 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 RAPH1Q70E73 1250 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 RTL3Q8N8U3 475 aaKnown RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 BCL7CQ8WUZ0 217 aaPredicted RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 IGSF8Q969P0 613 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 RILPQ96NA2 401 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 MIPEPQ99797 713 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 TRIM62Q9BVG3 475 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 IL22Q9GZX6 179 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 LRMDAQ9H2I8 198 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 TMEM161AQ9NX61 479 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 SOX13Q9UN79 622 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 DNAJC16Q9Y2G8 782 aa10.74□□□□□ -0.69
TPM1-210ENST00000558264 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 NYNRINQ9P2P1 1898 aaKnown RBP10.74□□□□□ -0.69
TPM1-210ENST00000558264 SLC12A8A0AV02 714 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 KLF11O14901 512 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 MATN3O15232 486 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 INPPL1O15357 1258 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 FGF10O15520 208 aaPredicted RBP10.73□□□□□ -0.69
TPM1-210ENST00000558264 ADAM12O43184 909 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 PROCP04070 461 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 SELPP16109 830 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 YWHAQP27348 245 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 HOXD10P28358 340 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 SPRP35270 261 aaPredicted RBP10.73□□□□□ -0.69
TPM1-210ENST00000558264 ERFP50548 548 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 SLC10A7Q0GE19 358 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 NFE2Q16621 373 aaPredicted RBP10.73□□□□□ -0.69
TPM1-210ENST00000558264 VWA5B1Q5TIE3 1220 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 DENND5AQ6IQ26 1287 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 KYAT3Q6YP21 454 aaKnown RBP10.73□□□□□ -0.69
TPM1-210ENST00000558264 CCDC91Q7Z6B0 441 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 SUGP1Q8IWZ8 645 aaKnown RBP10.73□□□□□ -0.69
TPM1-210ENST00000558264 CFAP52Q8N1V2 620 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 VPS39Q96JC1 886 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 C7orf26Q96N11 449 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 CASD1Q96PB1 797 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 PNPOQ9NVS9 261 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 LRFN2Q9ULH4 789 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 MTMR11A4FU01 709 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 TBKBP1A7MCY6 615 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 ERI2A8K979 691 aaKnown RBP10.73□□□□□ -0.69
TPM1-210ENST00000558264 SNNO75324 88 aaPredicted RBP10.73□□□□□ -0.69
TPM1-210ENST00000558264 TGDSO95455 350 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 VNN2O95498 520 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 ENO1P06733 434 aaKnown RBP10.73□□□□□ -0.69
TPM1-210ENST00000558264 CYP2C18P33260 490 aa10.73□□□□□ -0.69
TPM1-210ENST00000558264 SKIV2L2P42285 1042 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms