RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 KRT39Q6A163 491 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 NADSYN1Q6IA69 706 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 Q6ZSR6 202 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 BHLHA9Q7RTU4 235 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 HORMAD1Q86X24 394 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 JAMLQ86YT9 394 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 LGI2Q8N0V4 545 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 LINC00301Q8NCQ3 95 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 OR13H1Q8NG92 308 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 UBA3Q8TBC4 463 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 FRS2Q8WU20 508 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 BTN2A2Q8WVV5 523 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 KLK6Q92876 244 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 ERCC4Q92889 916 aaPredicted RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 NAT6Q93015 286 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 RNF34Q969K3 372 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 ARRDC3Q96B67 414 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 ZNF396Q96N95 335 aaPredicted RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 SERPINB11Q96P15 392 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 IL12RB2Q99665 862 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 MYOCQ99972 504 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 STRADBQ9C0K7 418 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 SLC25A18Q9H1K4 315 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 KCTD10Q9H3F6 313 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 MMRN2Q9H8L6 949 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 TMEM8AQ9HCN3 771 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 DYRK4Q9NR20 520 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 EXOC1Q9NV70 894 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 GEMIN8Q9NWZ8 242 aaKnown RBP5.33□□□□□ -1.56
SPG11-208ENST00000558155 FAM13BQ9NYF5 915 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 SLC25A13Q9UJS0 675 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 TSPAN16Q9UKR8 245 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 SARDHQ9UL12 918 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 TLR6Q9Y2C9 796 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 PCDHB11Q9Y5F2 797 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 PCDHGA7Q9Y5G6 932 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 U3KQA8 63 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 LOC400499M0QZD8 3231 aa5.33□□□□□ -1.56
SPG11-208ENST00000558155 HECTD1Q9ULT8 2610 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 F5H5T6 163 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 PLD2O14939 933 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 MUSKO15146 869 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 NVLO15381 856 aaKnown RBP5.32□□□□□ -1.56
SPG11-208ENST00000558155 AQP9O43315 295 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 ATP9BO43861 1147 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 NOBOXO60393 691 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 MOCS2O96007 188 aaPredicted RBP5.32□□□□□ -1.56
SPG11-208ENST00000558155 APOEP02649 317 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 LTFP02788 710 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 FAM87AP0C7U9 286 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 VAV1P15498 845 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 PDGFRAP16234 1089 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 PRLRP16471 622 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 JUNDP17535 347 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 CR2P20023 1033 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 TACR2P21452 398 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 SYT1P21579 422 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 CASP1P29466 404 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 SLC5A2P31639 672 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 RABIFP47224 123 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 CLDN2P57739 230 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 TAS2R38P59533 333 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 TLE1Q04724 770 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 NNTQ13423 1086 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 ADAM9Q13443 819 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 MORC3Q14149 939 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 DLG2Q15700 870 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 TBR1Q16650 682 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 ZNF284Q2VY69 593 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 MANEAQ5SRI9 462 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 AGBL4Q5VU57 503 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 ESRP1Q6NXG1 681 aaKnown RBP5.32□□□□□ -1.56
SPG11-208ENST00000558155 GUSBP11Q6P575 273 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 RAB11FIP2Q7L804 512 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 ABI3BPQ7Z7G0 1075 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 CHSY1Q86X52 802 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 FAM186BQ8IYM0 893 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 CEP57L1Q8IYX8 460 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 ATP6V0D2Q8N8Y2 350 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 FBXL13Q8NEE6 735 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 TMIEQ8NEW7 156 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 LMX1AQ8TE12 382 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 SLC35F5Q8WV83 523 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 CCDC47Q96A33 483 aaKnown RBP5.32□□□□□ -1.56
SPG11-208ENST00000558155 LIN37Q96GY3 246 aaPredicted RBP5.32□□□□□ -1.56
SPG11-208ENST00000558155 FEM1CQ96JP0 617 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 BTN2A3PQ96KV6 586 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 FCRL2Q96LA5 508 aaPredicted RBP5.32□□□□□ -1.56
SPG11-208ENST00000558155 BMFQ96LC9 184 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 HSFY1Q96LI6 401 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 CCDC114Q96M63 670 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 PRICKLE1Q96MT3 831 aaPredicted RBP5.32□□□□□ -1.56
SPG11-208ENST00000558155 SLC17A9Q9BYT1 436 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 NUCKS1Q9H1E3 243 aaKnown RBP5.32□□□□□ -1.56
SPG11-208ENST00000558155 ADNPQ9H2P0 1102 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 RAB20Q9NX57 234 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 PPP4R2Q9NY27 417 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 SPASTQ9UBP0 616 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 PADI4Q9UM07 663 aa5.32□□□□□ -1.56
SPG11-208ENST00000558155 TRAF3IP3Q9Y228 551 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms