RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SARNPP82979 210 aaKnown RBP12.66□□□□□ -0.38
TPM1-209ENST00000558072 CALCOCO2Q13137 446 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 PLEKHG6Q3KR16 790 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 TEX44Q53QW1 395 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 TEX35Q5T0J7 233 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 JAMLQ86YT9 394 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 ADHFE1Q8IWW8 467 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 GPR161Q8N6U8 529 aaKnown RBP12.66□□□□□ -0.38
TPM1-209ENST00000558072 FAM71DQ8N9W8 422 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 KDM1BQ8NB78 822 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 MAML1Q92585 1016 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 SPATA13Q96N96 652 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 LGMNQ99538 433 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 ERP44Q9BS26 406 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 FRMD8Q9BZ67 464 aaPredicted RBP12.66□□□□□ -0.38
TPM1-209ENST00000558072 NOL6Q9H6R4 1146 aaKnown RBP12.66□□□□□ -0.38
TPM1-209ENST00000558072 KCNK12Q9HB15 430 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 FAM114A2Q9NRY5 505 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 DNAJC17Q9NVM6 304 aaKnown RBP12.66□□□□□ -0.38
TPM1-209ENST00000558072 PLK2Q9NYY3 685 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 KLHL8Q9P2G9 620 aaPredicted RBP12.66□□□□□ -0.38
TPM1-209ENST00000558072 ASIC3Q9UHC3 531 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 MFHAS1Q9Y4C4 1052 aa12.66□□□□□ -0.38
TPM1-209ENST00000558072 MIA3Q5JRA6 1907 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.65□□□□□ -0.38
TPM1-209ENST00000558072 OTOL1A6NHN0 477 aaPredicted RBP12.65□□□□□ -0.38
TPM1-209ENST00000558072 ERI2A8K979 691 aaKnown RBP12.65□□□□□ -0.38
TPM1-209ENST00000558072 LOC730098B7Z3J9 87 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 CBX4O00257 560 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 ANXA9O76027 345 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 APODP05090 189 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 SRPRAP08240 638 aaKnown RBP12.65□□□□□ -0.38
TPM1-209ENST00000558072 BMP1P13497 986 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 ITIH2P19823 946 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 ADCY8P40145 1251 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 CSKP41240 450 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 KCNJ1P48048 391 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 SOX9P48436 509 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 ST8SIA6P61647 398 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 CDK16Q00536 496 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 LMAN2Q12907 356 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 TDGQ13569 410 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 CUL1Q13616 776 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 ZNF235Q14590 738 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 LBRQ14739 615 aaKnown RBP12.65□□□□□ -0.38
TPM1-209ENST00000558072 PARP6Q2NL67 630 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 PID1Q7Z2X4 250 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 KIAA0907Q7Z7F0 614 aaPredicted RBP12.65□□□□□ -0.38
TPM1-209ENST00000558072 RALGPS2Q86X27 583 aaPredicted RBP12.65□□□□□ -0.38
TPM1-209ENST00000558072 ETFBKMTQ8IXQ9 262 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 SLC44A3Q8N4M1 653 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 KCNV2Q8TDN2 545 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 ATXN2LQ8WWM7 1075 aaKnown RBP12.65□□□□□ -0.38
TPM1-209ENST00000558072 TTC17Q96AE7 1141 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 ASB2Q96Q27 587 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 PNKPQ96T60 521 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 IL12RB2Q99665 862 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 CEP44Q9C0F1 390 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 USP29Q9HBJ7 922 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 HPS4Q9NQG7 708 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 ABCB8Q9NUT2 735 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 NDFIP2Q9NV92 336 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 PLA2G4CQ9UP65 541 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 AAR2Q9Y312 384 aaKnown RBP12.65□□□□□ -0.38
TPM1-209ENST00000558072 OR51B4Q9Y5P0 310 aa12.65□□□□□ -0.38
TPM1-209ENST00000558072 COL6A3P12111 3177 aa12.65□□□□□ -0.39
TPM1-209ENST00000558072 MYOFQ9NZM1 2061 aa12.65□□□□□ -0.39
TPM1-209ENST00000558072 ANTXRLA6NF34 631 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 RNF103O00237 685 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 MAN2B1O00754 1011 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 TTI1O43156 1089 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 RAD51CO43502 376 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 TULP3O75386 442 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 HEXIM1O94992 359 aaKnown RBP12.64□□□□□ -0.39
TPM1-209ENST00000558072 SRFP11831 508 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 CA4P22748 312 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 HLA-FP30511 346 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 GJA4P35212 333 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 ACVRL1P37023 503 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 GRIA2P42262 883 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 PTGIRP43119 386 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 MMP13P45452 471 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 ECT2LQ008S8 904 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 NSUN2Q08J23 767 aaKnown RBP eCLIP12.64□□□□□ -0.39
TPM1-209ENST00000558072 GRM3Q14832 879 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 SLC14A2Q15849 920 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 PITRM1Q5JRX3 1037 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 TTC27Q6P3X3 843 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 PPP1R21Q6ZMI0 780 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 C12orf40Q86WS4 652 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 TEX26Q8N6G2 289 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 MYRIPQ8NFW9 859 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 OR7D4Q8NG98 312 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 WFDC5Q8TCV5 224 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 ISG20Q96AZ6 181 aaKnown RBP12.64□□□□□ -0.39
TPM1-209ENST00000558072 SNF8Q96H20 258 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 TEKT5Q96M29 485 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 LRRC1Q9BTT6 524 aa12.64□□□□□ -0.39
TPM1-209ENST00000558072 CINPQ9BW66 212 aaPredicted RBP12.64□□□□□ -0.39
TPM1-209ENST00000558072 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms