RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 GFPT2O94808 682 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 MT-CO1P00395 513 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 PRNPP04156 253 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 CTSLP07711 333 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 CHRNA3P32297 505 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 ANP32AP39687 249 aaKnown RBP14.98□□□□□ -0.01
SHMT2-235ENST00000557740 RECQLP46063 649 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-235ENST00000557740 OVGP1Q12889 678 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 C22orf39Q6P5X5 142 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 LINGO4Q6UY18 593 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 IQCHQ86VS3 1027 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 MFSD2AQ8NA29 543 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 GRIN3AQ8TCU5 1115 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 SAP25Q8TEE9 199 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 SLC20A1Q8WUM9 679 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 HAPLN3Q96S86 360 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 VPS16Q9H269 839 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 GANQ9H2C0 597 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 FAM207AQ9NSI2 230 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-235ENST00000557740 TMEM59LQ9UK28 342 aa14.98□□□□□ -0.01
SHMT2-235ENST00000557740 NOCTQ9UK39 431 aaKnown RBP14.98□□□□□ -0.01
SHMT2-235ENST00000557740 PLXNA2O75051 1894 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ILVBLA1L0T0 632 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 PRAMEF26H0Y7S4 382 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ENC1O14682 589 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 POLR2FP61218 127 aaKnown RBP14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ATP11AP98196 1134 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 CDR2Q01850 454 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 STAT4Q14765 748 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 KRT31Q15323 416 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 SHBQ15464 509 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 PIP5KL1Q5T9C9 394 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 TRNP1Q6NT89 227 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 RETSATQ6NUM9 610 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ZNF783Q6ZMS7 281 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ARCQ7LC44 396 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 EMC1Q8N766 993 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 TMIEQ8NEW7 156 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 OR7D4Q8NG98 312 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 OR2A12Q8NGT7 310 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ENOX1Q8TC92 643 aaKnown RBP14.97□□□□□ -0.01
SHMT2-235ENST00000557740 PPP1R16AQ96I34 528 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 CNDP2Q96KP4 475 aaKnown RBP14.97□□□□□ -0.01
SHMT2-235ENST00000557740 SPON2Q9BUD6 331 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ZYG11BQ9C0D3 744 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 TNKS2Q9H2K2 1166 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ERVMER34-1Q9H9K5 563 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ATP13A1Q9HD20 1204 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ARHGAP20Q9P2F6 1191 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 ASPMQ8IZT6 3477 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 TMEM131Q92545 1883 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 APC2O95996 2303 aa14.97□□□□□ -0.01
SHMT2-235ENST00000557740 TAF4O00268 1085 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 SMAD6O43541 496 aaKnown RBP14.96□□□□□ -0.01
SHMT2-235ENST00000557740 RNGTTO60942 597 aaKnown RBP14.96□□□□□ -0.01
SHMT2-235ENST00000557740 LDOC1O95751 146 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-235ENST00000557740 GLDCP23378 1020 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 SDC4P31431 198 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 SOX5P35711 763 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 KLK7P49862 253 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 CDO1Q16878 200 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 ARL13BQ3SXY8 428 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 CDKAL1Q5VV42 579 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 DHRS13Q6UX07 377 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 BNIPLQ7Z465 357 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 DRC7Q8IY82 874 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 EID2Q8N6I1 236 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 ANKRD20A12PQ8NF67 263 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 MDM1Q8TC05 714 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 ARRDC3Q96B67 414 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 MYOCQ99972 504 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 C11orf70Q9BRQ4 267 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 NLRC4Q9NPP4 1024 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 IL36AQ9UHA7 158 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 LHX6Q9UPM6 363 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 DAAM1Q9Y4D1 1078 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 PCDHGA1Q9Y5H4 931 aa14.96□□□□□ -0.01
SHMT2-235ENST00000557740 CACNA1GO43497 2377 aa14.96□□□□□ -0.02
SHMT2-235ENST00000557740 ACACAQ13085 2346 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 FAM149AA5PLN7 773 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 RFPL3O75679 317 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 ENDOD1O94919 500 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 CAPNS1P04632 268 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 CYP1A1P04798 512 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-235ENST00000557740 PRLRP16471 622 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 MMP8P22894 467 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 AKT2P31751 481 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 HNF1BP35680 557 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 ETFBP38117 255 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 RXRGP48443 463 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 SERPINH1P50454 418 aaKnown RBP14.95□□□□□ -0.02
SHMT2-235ENST00000557740 DNA2P51530 1060 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 TAS2R38P59533 333 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 FMO1Q01740 532 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 GNA12Q03113 381 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 SMAD1Q15797 465 aaKnown RBP14.95□□□□□ -0.02
SHMT2-235ENST00000557740 RWDD4Q6NW29 188 aaKnown RBP14.95□□□□□ -0.02
SHMT2-235ENST00000557740 NEK5Q6P3R8 708 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 TRIM72Q6ZMU5 477 aa14.95□□□□□ -0.02
SHMT2-235ENST00000557740 DPY19L3Q6ZPD9 716 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms