RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 IMPACTQ9P2X3 320 aa17.1■□□□□ 0.33
NEK9-211ENST00000557673 KNTC1P50748 2209 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 FAM47DPA6NHR8 397 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 ATMINO43313 823 aaPredicted RBP17.09■□□□□ 0.33
NEK9-211ENST00000557673 GJB6O95452 261 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 FTLP02792 175 aaPredicted RBP17.09■□□□□ 0.33
NEK9-211ENST00000557673 IGHV4-34P06331 123 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 JUPP14923 745 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 ABCB4P21439 1286 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 RRM1P23921 792 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 NOS2P35228 1153 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 GALCP54803 685 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 EIF4EBP2Q13542 120 aaPredicted RBP17.09■□□□□ 0.33
NEK9-211ENST00000557673 SLC18A3Q16572 532 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 HNRNPA1L2Q32P51 320 aaKnown RBP17.09■□□□□ 0.33
NEK9-211ENST00000557673 C6orf118Q5T5N4 469 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 RAP1GAP2Q684P5 730 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 LAYNQ6UX15 382 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 PHLDB2Q86SQ0 1253 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 CHSY1Q86X52 802 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 MARCH9Q86YJ5 346 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 LGI2Q8N0V4 545 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 NXPE2Q96DL1 559 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 TRIM11Q96F44 468 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 OMDQ99983 421 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 ORAI3Q9BRQ5 295 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 DEF6Q9H4E7 631 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.09■□□□□ 0.33
NEK9-211ENST00000557673 FZD4Q9ULV1 537 aa17.09■□□□□ 0.33
NEK9-211ENST00000557673 SMG1Q96Q15 3661 aaKnown RBP17.09■□□□□ 0.33
NEK9-211ENST00000557673 CELSR3Q9NYQ7 3312 aa17.08■□□□□ 0.33
NEK9-211ENST00000557673 LOC400499M0QZD8 3231 aa17.08■□□□□ 0.33
NEK9-211ENST00000557673 TARSL2A2RTX5 802 aaKnown RBP17.08■□□□□ 0.32
NEK9-211ENST00000557673 ENC1O14682 589 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 MOCS3O95396 460 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 LDOC1O95751 146 aaPredicted RBP17.08■□□□□ 0.32
NEK9-211ENST00000557673 ITGAVP06756 1048 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 TACR2P21452 398 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 ABCG1P45844 678 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 ARRB1P49407 418 aaPredicted RBP17.08■□□□□ 0.32
NEK9-211ENST00000557673 IL9RQ01113 521 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 CST6Q15828 149 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 SLC45A4Q5BKX6 768 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 KCNT1Q5JUK3 1230 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 PPP1R15BQ5SWA1 713 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 ALKBH5Q6P6C2 394 aaKnown RBP17.08■□□□□ 0.32
NEK9-211ENST00000557673 NCEH1Q6PIU2 408 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 CARNMT1Q8N4J0 409 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 EMC1Q8N766 993 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 SPC24Q8NBT2 197 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 OR2T34Q8NGX1 318 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 JOSD2Q8TAC2 188 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 NT5C3BQ969T7 300 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 ZNF653Q96CK0 615 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 LMLNQ96KR4 655 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 BTN2A3PQ96KV6 586 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 NPY6RQ99463 290 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 SELENOOQ9BVL4 669 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 NHEJ1Q9H9Q4 299 aaPredicted RBP17.08■□□□□ 0.32
NEK9-211ENST00000557673 GDF3Q9NR23 364 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 AASDHPPTQ9NRN7 309 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.08■□□□□ 0.32
NEK9-211ENST00000557673 STAP1Q9ULZ2 295 aa17.08■□□□□ 0.32
NEK9-211ENST00000557673 ASXL3Q9C0F0 2248 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 SIN3BO75182 1162 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 RNASEH2AO75792 299 aaKnown RBP17.07■□□□□ 0.32
NEK9-211ENST00000557673 SRPRAP08240 638 aaKnown RBP17.07■□□□□ 0.32
NEK9-211ENST00000557673 MYBL1P10243 752 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 TFE3P19532 575 aaPredicted RBP17.07■□□□□ 0.32
NEK9-211ENST00000557673 CD38P28907 300 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 CSKP41240 450 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 SULT1E1P49888 294 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 CCR5P51681 352 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 RNASE9P60153 205 aaKnown RBP17.07■□□□□ 0.32
NEK9-211ENST00000557673 CDH18Q13634 790 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 PLEKHA7Q6IQ23 1121 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 CNDP2Q96KP4 475 aaKnown RBP17.07■□□□□ 0.32
NEK9-211ENST00000557673 SLC6A18Q96N87 628 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 MCEEQ96PE7 176 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 UBL7Q96S82 380 aaPredicted RBP17.07■□□□□ 0.32
NEK9-211ENST00000557673 NEUROG2Q9H2A3 272 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 RRN3Q9NYV6 651 aa17.07■□□□□ 0.32
NEK9-211ENST00000557673 EDDM13A0A1B0GTR0 161 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 A0A1W2PP55 124 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 C2CD4BA6NLJ0 364 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 SIGLEC16A6NMB1 481 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 KCNU1A8MYU2 1149 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 PLK4O00444 970 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 MID1O15344 667 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 AKR1B10O60218 316 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 RFPL3O75679 317 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 LUC7L3O95232 432 aaKnown RBP17.06■□□□□ 0.32
NEK9-211ENST00000557673 ADH1BP00325 375 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 KRT3P12035 628 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 CCR1P32246 355 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 NME3Q13232 169 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 SLC25A52Q3SY17 297 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 FSCBQ5H9T9 825 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 CCDC122Q5T0U0 273 aa17.06■□□□□ 0.32
NEK9-211ENST00000557673 RNF219Q5W0B1 726 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms