RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 NUMBP49757 651 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 GEMIN4P57678 1058 aaKnown RBP12.78□□□□□ -0.36
SLIRP-211ENST00000557623 YBEYP58557 167 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-211ENST00000557623 CREB5Q02930 508 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 SPEM2Q0P670 501 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 ELAVL3Q14576 367 aaKnown RBP12.78□□□□□ -0.36
SLIRP-211ENST00000557623 POLD3Q15054 466 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-211ENST00000557623 DLG2Q15700 870 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 CSRP2Q16527 193 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 HADHQ16836 314 aaKnown RBP12.78□□□□□ -0.36
SLIRP-211ENST00000557623 BOLA3Q53S33 107 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 DSG4Q86SJ6 1040 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 TMEFF1Q8IYR6 380 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 FRMD1Q8N878 549 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 ATP11CQ8NB49 1132 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 FRS2Q8WU20 508 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 PEBP4Q96S96 227 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 ACE2Q9BYF1 805 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-211ENST00000557623 MTG2Q9H4K7 406 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 WSB2Q9NYS7 404 aaPredicted RBP12.78□□□□□ -0.36
SLIRP-211ENST00000557623 INTUQ9ULD6 942 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 NEU3Q9UQ49 428 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 NCKAP1Q9Y2A7 1128 aa12.78□□□□□ -0.36
SLIRP-211ENST00000557623 USP34Q70CQ2 3546 aa12.77□□□□□ -0.36
SLIRP-211ENST00000557623 BCLAF3A2AJT9 711 aaKnown RBP12.77□□□□□ -0.37
SLIRP-211ENST00000557623 ALOX15BO15296 676 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 DAPK3O43293 454 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 ADH1BP00325 375 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 MPLP40238 635 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 HCAR3P49019 387 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 LYSMD4Q5XG99 296 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 USP30Q70CQ3 517 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 CYP2U1Q7Z449 544 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 CACUL1Q86Y37 369 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 STK40Q8N2I9 435 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 TEKT4Q8WW24 435 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 OR8D1Q8WZ84 308 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 FOXJ1Q92949 421 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 ARHGEF2Q92974 986 aaKnown RBP12.77□□□□□ -0.37
SLIRP-211ENST00000557623 TOE1Q96GM8 510 aaKnown RBP12.77□□□□□ -0.37
SLIRP-211ENST00000557623 PANX2Q96RD6 677 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 CEP44Q9C0F1 390 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 PABPC3Q9H361 631 aaKnown RBP12.77□□□□□ -0.37
SLIRP-211ENST00000557623 ZWILCHQ9H900 591 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 VPS45Q9NRW7 570 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 SEMA4GQ9NTN9 838 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 SPTLC3Q9NUV7 552 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 NDFIP2Q9NV92 336 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 GPATCH2LQ9NWQ4 482 aa12.77□□□□□ -0.37
SLIRP-211ENST00000557623 OTOGLQ3ZCN5 2332 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 FAM186AA6NE01 2351 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-211ENST00000557623 C1QTNF3-AMACRE9PGA6 284 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 H3BRJ5 948 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 MCF2LO15068 1137 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 KDELR3O43731 214 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 ZMPSTE24O75844 475 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 MT-CO1P00395 513 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 C5AR1P21730 350 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 SLC8A1P32418 973 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 CYLC1P35663 651 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-211ENST00000557623 ACVRL1P37023 503 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 ARL4AP40617 200 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 RECQLP46063 649 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-211ENST00000557623 SERPINH1P50454 418 aaKnown RBP12.76□□□□□ -0.37
SLIRP-211ENST00000557623 ARF5P84085 180 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 CST6Q15828 149 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 DPYSL2Q16555 572 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 CA9Q16790 459 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 PARP15Q460N3 678 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 PPP6R3Q5H9R7 873 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-211ENST00000557623 SYCP2LQ5T4T6 812 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 FAM46CQ5VWP2 391 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 LINGO4Q6UY18 593 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 RFX8Q6ZV50 586 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 CYP4V2Q6ZWL3 525 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-211ENST00000557623 ZNF354CQ86Y25 554 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 MMAAQ8IVH4 418 aaKnown RBP12.76□□□□□ -0.37
SLIRP-211ENST00000557623 RHOT2Q8IXI1 618 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 KIAA2013Q8IYS2 634 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 CCDC170Q8IYT3 715 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 UMODL1-AS1Q8N2C9 162 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 CADM4Q8NFZ8 388 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 GANCQ8TET4 914 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 ZNF419Q96HQ0 510 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-211ENST00000557623 BTBD6Q96KE9 485 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 KCTD15Q96SI1 283 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-211ENST00000557623 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 PACSIN1Q9BY11 444 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 BTBD1Q9H0C5 482 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 PCED1AQ9H1Q7 454 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 SGK2Q9HBY8 427 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 CD93Q9NPY3 652 aa12.76□□□□□ -0.37
SLIRP-211ENST00000557623 LUC7LQ9NQ29 371 aaKnown RBP12.76□□□□□ -0.37
SLIRP-211ENST00000557623 MID1O15344 667 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 PROSCO94903 275 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 IL1BP01584 269 aa12.75□□□□□ -0.37
SLIRP-211ENST00000557623 RARAP10276 462 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms