RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PPP2CAP67775 309 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 RHDQ02161 417 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 STK4Q13043 487 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 ILKQ13418 452 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 SQSTM1Q13501 440 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 LY6DQ14210 128 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 C9orf64Q5T6V5 341 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 ARHGAP40Q5TG30 622 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 PIK3R6Q5UE93 754 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 CEP135Q66GS9 1140 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 PM20D1Q6GTS8 502 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 RFWD3Q6PCD5 774 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 KDM7AQ6ZMT4 941 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 KANSL1Q7Z3B3 1105 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 PCGF5Q86SE9 256 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 SPATS2Q86XZ4 545 aaKnown RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 MMAAQ8IVH4 418 aaKnown RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 DHX40Q8IX18 779 aaKnown RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 CACTIN-AS1Q8N1I8 211 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 AADATQ8N5Z0 425 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 SLC4A11Q8NBS3 891 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 KIAA0895Q8NCT3 520 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 TMEM174Q8WUU8 243 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 EDEM1Q92611 657 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 SCARF2Q96GP6 870 aaPredicted RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 HIC2Q96JB3 615 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 LMLNQ96KR4 655 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 MRGPRX3Q96LB0 322 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 OMDQ99983 421 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 ARPC5LQ9BPX5 153 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 ULBP1Q9BZM6 244 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 UBXN6Q9BZV1 441 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 TSPAN10Q9H1Z9 355 aaPredicted RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 CLMPQ9H6B4 373 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 ENAMQ9NRM1 1142 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 OLA1Q9NTK5 396 aaKnown RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 FAM8A1Q9UBU6 413 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 ADAMTS1Q9UHI8 967 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 INTS6Q9UL03 887 aaKnown RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 FZD4Q9ULV1 537 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 SCML1Q9UN30 329 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 MTMR6Q9Y217 621 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 HBS1LQ9Y450 684 aaKnown RBP6.06□□□□□ -1.44
VPS33B-207ENST00000557470 BOD1L1Q8NFC6 3051 aa6.06□□□□□ -1.44
VPS33B-207ENST00000557470 A6NJY4 79 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 YJEFN3A6XGL0 299 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 E7ENQ6 273 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 TRIM38O00635 465 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 PDXKO00764 312 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 OIP5O43482 229 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 LATO43561 262 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 SIGLEC6O43699 453 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 RRP9O43818 475 aaKnown RBP6.05□□□□□ -1.44
VPS33B-207ENST00000557470 NRDCO43847 1150 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 CUTAO60888 179 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 PPP6R2O75170 966 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 BPNT1O95861 308 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 MT-CO3P00414 261 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 PDGFAP04085 211 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 MPOP05164 745 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 SLFN14P0C7P3 912 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 KRT10P13645 584 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 C6P13671 934 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 ACP1P24666 158 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 SLC6A4P31645 630 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 SLC8A1P32418 973 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 RXRGP48443 463 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 VAMP7P51809 220 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 METAP1P53582 386 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 RAD23BP54727 409 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 TMPRSS3P57727 454 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 ST8SIA6P61647 398 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 GABREP78334 506 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 CTBSQ01459 385 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 PPP3CAQ08209 521 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 ADIGQ0VDE8 80 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 TCEA2Q15560 299 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 GOLGA7BQ2TAP0 167 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 SLC45A4Q5BKX6 768 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 FAM133BQ5BKY9 247 aaKnown RBP6.05□□□□□ -1.44
VPS33B-207ENST00000557470 EFHC2Q5JST6 749 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 MPP7Q5T2T1 576 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 BSPRYQ5W0U4 402 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 ARHGAP17Q68EM7 881 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 NADSYN1Q6IA69 706 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 NAPEPLDQ6IQ20 393 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 MMS22LQ6ZRQ5 1243 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 MFN1Q8IWA4 741 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 OXR1Q8N573 874 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 FAM181AQ8N9Y4 354 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 ANKRD52Q8NB46 1076 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 ZNF248Q8NDW4 579 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 OR14C36Q8NHC7 312 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 RNF139Q8WU17 664 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 TTC9Q92623 222 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 SEMA4DQ92854 862 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 TTC17Q96AE7 1141 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 MYEOVQ96EZ4 313 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 WBP1Q96G27 269 aa6.05□□□□□ -1.44
VPS33B-207ENST00000557470 PRICKLE1Q96MT3 831 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms