RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ANO9A1A5B4 782 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 C2orf78A6NCI8 922 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CCDC169A6NNP5 214 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 MEI4A8MW99 385 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 LACTBL1A8MY62 500 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CYB561D2O14569 222 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CLDN3O15551 220 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 DEXIO95424 95 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 LDOC1O95751 146 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 IGLV3-19P01714 112 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CYP1A1P04798 512 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 TACR2P21452 398 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 MUTP22033 750 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 VAMP1P23763 118 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 RPA1P27694 616 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 PDIA3P30101 505 aaKnown RBP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 TNFSF9P41273 254 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 GAD2Q05329 585 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 MCL1Q07820 350 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 ILKQ13418 452 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 KCNB1Q14721 858 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 NCAPHQ15003 741 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 SAFBQ15424 915 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CALCRLQ16602 461 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 DDR2Q16832 855 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CR1LQ2VPA4 569 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 INAVAQ3KP66 663 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CCDC157Q569K6 752 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 DCAF12L1Q5VU92 463 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 GTF2IRD2BQ6EKJ0 949 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 Q6ZUG5 572 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 FILIP1Q7Z7B0 1213 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 GTF2IRD2Q86UP8 949 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 STK32CQ86UX6 486 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CD302Q8IX05 232 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 LSMEM2Q8N112 164 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 ZCCHC9Q8N567 271 aaKnown RBP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 DCBLD1Q8N8Z6 715 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 LEO1Q8WVC0 666 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CPLX3Q8WVH0 158 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 RFFLQ8WZ73 363 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 ZBTB45Q96K62 511 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 LGMNQ99538 433 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 GPR174Q9BXC1 333 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CCSER1Q9C0I3 900 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 RPF1Q9H9Y2 349 aaKnown RBP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 C17orf75Q9HAS0 396 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 CPNE5Q9HCH3 593 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 POLD4Q9HCU8 107 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 ZDHHC4Q9NPG8 344 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 STARD5Q9NSY2 213 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 USP36Q9P275 1121 aaKnown RBP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 FTSJ1Q9UET6 329 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 ANKRD6Q9Y2G4 727 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 COA3Q9Y2R0 106 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 HEMK1Q9Y5R4 338 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-223ENST00000557076 FBN2P35556 2912 aa5.01□□□□□ -1.61
SCFD1-223ENST00000557076 ITPR3Q14573 2671 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 TRIP11Q15643 1979 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 CENPEQ02224 2701 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 CLEC18AA5D8T8 446 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 ARHGEF35A5YM69 484 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 K7ENP7 123 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 CYR61O00622 381 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 PPEF2O14830 753 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 HOXC11O43248 304 aaPredicted RBP5□□□□□ -1.61
SCFD1-223ENST00000557076 TULP3O75386 442 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 MED24O75448 989 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 RFPL3O75679 317 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 KRT38O76015 456 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 OLFM2O95897 454 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 CXCL8P10145 99 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 CR2P20023 1033 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 CYP2F1P24903 491 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 FPR2P25090 351 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 STAT5AP42229 794 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 GPR15P49685 360 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 CCT8P50990 548 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 TPMTP51580 245 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 INHBCP55103 352 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 PEX3P56589 373 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 ERVPABLB-1P60509 514 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 CCT2P78371 535 aaKnown RBP5□□□□□ -1.61
SCFD1-223ENST00000557076 E2F1Q01094 437 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 TSPY1Q01534 308 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 SPAG1Q07617 926 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 KCNAB2Q13303 367 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 ADAM9Q13443 819 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 NOLC1Q14978 699 aaKnown RBP eCLIP5□□□□□ -1.61
SCFD1-223ENST00000557076 CFAP221Q4G0U5 840 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 LY6G5CQ5SRR4 150 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 HES3Q5TGS1 186 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 SDHAF4Q5VUM1 108 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 C9orf57Q5W0N0 161 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 BTBD8Q5XKL5 378 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 WSCD1Q658N2 575 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 INO80CQ6PI98 192 aaPredicted RBP5□□□□□ -1.61
SCFD1-223ENST00000557076 CLEC18BQ6UXF7 455 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 PIK3AP1Q6ZUJ8 805 aa5□□□□□ -1.61
SCFD1-223ENST00000557076 LIMS2Q7Z4I7 341 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms