RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 CLDN5O00501 218 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 CDK2AP1O14519 115 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 SLC31A1O15431 190 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 PLRG1O43660 514 aaKnown RBP5.94□□□□□ -1.46
ATXN3-245ENST00000556958 CDC45O75419 566 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 LDHAP00338 332 aaKnown RBP5.94□□□□□ -1.46
ATXN3-245ENST00000556958 IL1BP01584 269 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 ANXA6P08133 673 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 PRKAR1AP10644 381 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 NME1P15531 152 aaKnown RBP5.94□□□□□ -1.46
ATXN3-245ENST00000556958 CD1EP15812 388 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 PDCP20941 246 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 HNRNPA2B1P22626 353 aaKnown RBP5.94□□□□□ -1.46
ATXN3-245ENST00000556958 PSMD8P48556 350 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 PER3P56645 1201 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 CDC20Q12834 499 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 TESK1Q15569 626 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 INPP5JQ15735 1006 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-245ENST00000556958 ZNF542PQ5EBM4 170 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 ZRANB3Q5FWF4 1079 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 NEK5Q6P3R8 708 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 Q6ZSR6 202 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 GDF7Q7Z4P5 450 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 DENND1CQ8IV53 801 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 AADATQ8N5Z0 425 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 MYCT1Q8N699 235 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 B3GALNT2Q8NCR0 500 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 OR13H1Q8NG92 308 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 LMX1AQ8TE12 382 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 POMGNT1Q8WZA1 660 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 TNFRSF25Q93038 417 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 SMARCD1Q96GM5 515 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 ANKRD36BP1Q96IX9 119 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 TNIP3Q96KP6 325 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 TAAR9Q96RI9 348 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 FAM129BQ96TA1 746 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 BOCQ9BWV1 1114 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 MTG2Q9H4K7 406 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 GPN2Q9H9Y4 310 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-245ENST00000556958 TMEM30AQ9NV96 361 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.94□□□□□ -1.46
ATXN3-245ENST00000556958 SCHIP1Q9P0W5 487 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-245ENST00000556958 STRIP2Q9ULQ0 834 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 SCML2Q9UQR0 700 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 CA5BQ9Y2D0 317 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 HRH3Q9Y5N1 445 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 HS3ST3A1Q9Y663 406 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 SPENQ96T58 3664 aaKnown RBP5.94□□□□□ -1.46
ATXN3-245ENST00000556958 MYO16Q9Y6X6 1858 aa5.94□□□□□ -1.46
ATXN3-245ENST00000556958 APCP25054 2843 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 CEP192Q8TEP8 1941 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 CELSR1Q9NYQ6 3014 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 SPTY2D1-AS1A0A0U1RR47 76 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 A6NNZ2 444 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 ANKRD63C9JTQ0 380 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 PRPF6O94906 941 aaKnown RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 NADKO95544 446 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 TNNC2P02585 160 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 RPLP0P05388 317 aaKnown RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 SLFN14P0C7P3 912 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 TCN2P20062 427 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 CAPN3P20807 821 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 ITGA3P26006 1051 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 MAP4P27816 1152 aaKnown RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 HOXD9P28356 352 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 PTGER4P35408 488 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 UGT1A3P35503 534 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 NNMTP40261 264 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 ETV5P41161 510 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 NOP2P46087 812 aaKnown RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 MAP2K3P46734 347 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 PGFP49763 221 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 RNF144AP50876 292 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 EPHA4P54764 986 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 HDAC4P56524 1084 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 RNASE9P60153 205 aaKnown RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 CCL7P80098 99 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 GTF2BQ00403 316 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 ZFP36L1Q07352 338 aaKnown RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 MRPL49Q13405 166 aaKnown RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 ELAVL3Q14576 367 aaKnown RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 DRAP1Q14919 205 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 DUOXA2Q1HG44 320 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 SMTNL2Q2TAL5 461 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 MPP7Q5T2T1 576 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 RNF219Q5W0B1 726 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 SLC39A4Q6P5W5 647 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 CRELD2Q6UXH1 353 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 DYMQ7RTS9 669 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 ABI3BPQ7Z7G0 1075 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 PARGQ86W56 976 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 CCDC117Q8IWD4 279 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 BRSK2Q8IWQ3 736 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 SLC35F3Q8IY50 421 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 SYT2Q8N9I0 419 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-245ENST00000556958 CCDC112Q8NEF3 446 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 CXorf38Q8TB03 319 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 TTC17Q96AE7 1141 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 PPP1R13BQ96KQ4 1090 aa5.93□□□□□ -1.46
ATXN3-245ENST00000556958 FAM213AQ9BRX8 229 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms