RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 LRRC45Q96CN5 670 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 IQCDQ96DY2 449 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 RBM41Q96IZ5 413 aaKnown RBP4□□□□□ -1.77
FOXN3-213ENST00000556916 IFT74Q96LB3 600 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 TRAPPC9Q96Q05 1148 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 GSDMAQ96QA5 445 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 LRRC2Q9BYS8 371 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 DPH1Q9BZG8 443 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 TRIM4Q9C037 500 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 NSRP1Q9H0G5 558 aaKnown RBP4□□□□□ -1.77
FOXN3-213ENST00000556916 SIK2Q9H0K1 926 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 VCXQ9H320 206 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 NDST4Q9H3R1 872 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 PLCB1Q9NQ66 1216 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 GDF3Q9NR23 364 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 SACM1LQ9NTJ5 587 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 WDR35Q9P2L0 1181 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 HDAC6Q9UBN7 1215 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 SERGEFQ9UGK8 458 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 CAPN11Q9UMQ6 739 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 SNX12Q9UMY4 172 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 SSX2IPQ9Y2D8 614 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 TMX2Q9Y320 296 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 CACNA1IQ9P0X4 2223 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 MARF1Q9Y4F3 1742 aaKnown RBP4□□□□□ -1.77
FOXN3-213ENST00000556916 KIF1AQ12756 1690 aa4□□□□□ -1.77
FOXN3-213ENST00000556916 MYH14Q7Z406 1995 aaKnown RBP4□□□□□ -1.77
FOXN3-213ENST00000556916 SCN11AQ9UI33 1791 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 A2ML1A8K2U0 1454 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 ZNF804BA4D1E1 1349 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 TJP1Q07157 1748 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 DIP2CQ9Y2E4 1556 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 MST1RQ04912 1400 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 A0A087WWL8 130 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 KLF18A0A0U1RQI7 1052 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 SH2B2O14492 632 aaPredicted RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 TRIAP1O43715 76 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 ATP2C2O75185 946 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 RNF8O76064 485 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 ZBED1O96006 694 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 KRT14P02533 472 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 NR2F6P10588 404 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 MYF5P13349 255 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 BRAFP15056 766 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 NQO1P15559 274 aaKnown RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 EN2P19622 333 aaPredicted RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 ABCD1P33897 745 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 RANBP1P43487 201 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 PXNP49023 591 aaPredicted RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 CTCFP49711 727 aaPredicted RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 CCT8P50990 548 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 TFF2Q03403 129 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 TEFQ10587 303 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 GRM1Q13255 1194 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 CUL4BQ13620 913 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 KLF9Q13886 244 aaPredicted RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 BYSLQ13895 437 aaKnown RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 IDI1Q13907 227 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 KRT31Q15323 416 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 SAFBQ15424 915 aaKnown RBP eCLIP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 SPA17Q15506 151 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 ZRSR2Q15696 482 aaKnown RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 CFAP221Q4G0U5 840 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 AMOTQ4VCS5 1084 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 ODF2Q5BJF6 829 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 RILPL1Q5EBL4 403 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 DCAF12L1Q5VU92 463 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 NUGGCQ68CJ6 796 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 HAUS3Q68CZ6 603 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 SUMO4Q6EEV6 95 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 ZNF783Q6ZMS7 281 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 CROCCP2Q86T23 111 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 SESTD1Q86VW0 696 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 MICU3Q86XE3 530 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 GBP7Q8N8V2 638 aaPredicted RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 KBTBD3Q8NAB2 608 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 OR6B3Q8NGW1 331 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 OR56A3Q8NH54 315 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 CFAP61Q8NHU2 1237 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 NCOA7Q8NI08 942 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 SMCR8Q8TEV9 937 aaPredicted RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 AGAP11Q8TF27 550 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 KBTBD7Q8WVZ9 684 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 LZICQ8WZA0 190 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 WASF1Q92558 559 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 RAPGEF5Q92565 580 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 RFKQ969G6 155 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 CHMP6Q96FZ7 201 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 ZNF570Q96NI8 536 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 CHP1Q99653 195 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 MESP1Q9BRJ9 268 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 PYM1Q9BRP8 204 aaKnown RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 MMTAG2Q9BU76 263 aaKnown RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 VCX3BQ9H321 246 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 AS3MTQ9HBK9 375 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 VCX3AQ9NNX9 186 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 RWDD2AQ9UIY3 292 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 NDRG4Q9ULP0 352 aaKnown RBP3.99□□□□□ -1.77
FOXN3-213ENST00000556916 SLC12A4Q9UP95 1085 aa3.99□□□□□ -1.77
FOXN3-213ENST00000556916 PA2G4Q9UQ80 394 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms