RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 TRIM58Q8NG06 486 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 RIN3Q8TB24 985 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 RNF139Q8WU17 664 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 SMG7Q92540 1137 aaKnown RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 RAPGEF5Q92565 580 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 HSPH1Q92598 858 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 CENPIQ92674 756 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 GOLGA1Q92805 767 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 NT5C3BQ969T7 300 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 MYEOVQ96EZ4 313 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 TRMT2BQ96GJ1 504 aaKnown RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 CRELD1Q96HD1 420 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 HES6Q96HZ4 224 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 CAPZA3Q96KX2 299 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 FCRL2Q96LA5 508 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 SLITRK1Q96PX8 696 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 ALS2CR12Q96Q35 445 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 NAPGQ99747 312 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 SNRNP25Q9BV90 132 aaKnown RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 SLC46A2Q9BY10 475 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 PIDD1Q9HB75 910 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 WDR6Q9NNW5 1121 aaKnown RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 TLR8Q9NR97 1041 aaKnown RBP5.49□□□□□ -1.53
ATXN3-244ENST00000556898 ABCC13Q9NSE7 274 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 COMMD8Q9NX08 183 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 DDIT4Q9NX09 232 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 SMPD4Q9NXE4 827 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 TRPM5Q9NZQ8 1165 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 MAFFQ9ULX9 164 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 USP18Q9UMW8 372 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 MFHAS1Q9Y4C4 1052 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 SPTBN4Q9H254 2564 aa5.49□□□□□ -1.53
ATXN3-244ENST00000556898 MYO16Q9Y6X6 1858 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 FAM72CH0Y354 149 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 KCNK3O14649 394 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 TRDMT1O14717 391 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 RNF8O76064 485 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 URI1O94763 535 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 MOCS2O96007 188 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 OAS1P00973 400 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 MBL2P11226 248 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 RALAP11233 206 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 KRT10P13645 584 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 CTNNA1P35221 906 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 SLC1A1P43005 524 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 CXCR3P49682 368 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 ST13P50502 369 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 ARSEP51690 589 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 TBX4P57082 545 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 IFI16Q16666 785 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 PABPC1LQ4VXU2 614 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 DNTTIP2Q5QJE6 756 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 EXOSC6Q5RKV6 272 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 HECTD3Q5T447 861 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 ZFYVE27Q5T4F4 411 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 GPR158Q5T848 1215 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 FAM72AQ5TYM5 149 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 SNX30Q5VWJ9 437 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 PAPD7Q5XG87 772 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 FAM72DQ6L9T8 149 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 MSANTD2Q6P1R3 559 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 MFSD7Q6UXD7 560 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 PDZD4Q76G19 769 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 B4GALNT4Q76KP1 1039 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 ARCQ7LC44 396 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 STRADAQ7RTN6 431 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 ADAT2Q7Z6V5 191 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 FAM72BQ86X60 149 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 RHOT1Q8IXI2 618 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 SYCE1Q8N0S2 351 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 ELMOD1Q8N336 334 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 ARHGAP18Q8N392 663 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 SLC44A3Q8N4M1 653 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 CCDC33Q8N5R6 958 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 MAB21L3Q8N8X9 362 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 SUMF1Q8NBK3 374 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 FNIP1Q8TF40 1166 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 HDAC7Q8WUI4 952 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 RSPRY1Q96DX4 576 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 P2RY11Q96G91 374 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 SLC39A13Q96H72 371 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 OSBPL9Q96SU4 736 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 FAM118BQ9BPY3 351 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 HEMGNQ9BXL5 484 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 CEP44Q9C0F1 390 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 TKTL2Q9H0I9 626 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 PLEKHA4Q9H4M7 779 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 DHX35Q9H5Z1 703 aaKnown RBP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 SFXN1Q9H9B4 322 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 ASAH2Q9NR71 780 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 CLIC5Q9NZA1 410 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.48□□□□□ -1.53
ATXN3-244ENST00000556898 MARCH2Q9P0N8 246 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 FZD10Q9ULW2 581 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 STAP1Q9ULZ2 295 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 SNX12Q9UMY4 172 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 CCL26Q9Y258 94 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 SIT1Q9Y3P8 196 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 JRKLQ9Y4A0 524 aa5.48□□□□□ -1.53
ATXN3-244ENST00000556898 ASB3Q9Y575 518 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms