RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, human

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-222	ENST00000556768	ZNF252P-AS1	Q0IIN9	211 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	DLG2	Q15700	870 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	C2CD6	Q53TS8	623 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	RETSAT	Q6NUM9	610 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	DPY19L2P1	Q6NXN4	242 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	AOPEP	Q8N6M6	819 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	DEFB124	Q8NES8	71 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	OR14C36	Q8NHC7	312 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	SLC30A5	Q8TAD4	765 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	IGSF8	Q969P0	613 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	MYEOV	Q96EZ4	313 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	MRGPRX3	Q96LB0	322 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	CFAP57	Q96MR6	1250 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	ERGIC2	Q96RQ1	377 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBCB	Q99426	244 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	SELENOO	Q9BVL4	669 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	ACE2	Q9BYF1	805 aa	Predicted RBP	7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	GAN	Q9H2C0	597 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	C6orf106	Q9H6K1	298 aa	Predicted RBP	7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	RETREG1	Q9H6L5	497 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	DYRK4	Q9NR20	520 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	VTI1B	Q9UEU0	232 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	HPCAL4	Q9UM19	191 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	SIK3	Q9Y2K2	1263 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	ABCA7	Q8IZY2	2146 aa		7.52	□□□□□ -1.21
SCFD1-222	ENST00000556768	ACACB	O00763	2458 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBC1D3D	A0A087WVF3	549 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBC1D3I	A0A087WXS9	549 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBC1D3E	A0A087X179	549 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBC1D3K	A0A087X1G2	549 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768		A0A1W2PP55	124 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBC1D3F	A6NER0	549 aa	Predicted RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBC1D3L	B9A6J9	549 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768		E9PAM4	449 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	DFNA5	O60443	496 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TRIM16	O95361	564 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	SERPINC1	P01008	464 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	CYP1A1	P04798	512 aa	Predicted RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBC1D3H	P0C7X1	549 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	FER	P16591	822 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	PTMS	P20962	102 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	FLT3	P36888	993 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	PSMD8	P48556	350 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	CSNK1E	P49674	416 aa	Known RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	STK19	P49842	368 aa	Predicted RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	KLK7	P49862	253 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	ZNF165	P49910	485 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	JAM2	P57087	298 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	RACK1	P63244	317 aa	Known RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	SIM1	P81133	766 aa	Predicted RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	GRIK2	Q13002	908 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	SEMA3B	Q13214	749 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	CDO1	Q16878	200 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	ANO6	Q4KMQ2	910 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	SLC45A4	Q5BKX6	768 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBC1D3G	Q6DHY5	549 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBC1D3C	Q6IPX1	549 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	CXorf57	Q6NSI4	855 aa	Known RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	RWDD4	Q6NW29	188 aa	Known RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	CAVIN1	Q6NZI2	390 aa	Known RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	DCUN1D2	Q6PH85	259 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	THSD4	Q6ZMP0	1018 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	ZNF783	Q6ZMS7	281 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	NYAP1	Q6ZVC0	841 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TFAP2D	Q7Z6R9	452 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	FAM131B	Q86XD5	332 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TBC1D3	Q8IZP1	549 aa	Predicted RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	STK40	Q8N2I9	435 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	OR2T34	Q8NGX1	318 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	SETD7	Q8WTS6	366 aa	Known RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	SLC20A1	Q8WUM9	679 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	PTPRN2	Q92932	1015 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	BIRC7	Q96CA5	298 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	MYO19	Q96H55	970 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	BPIFA3	Q9BQP9	254 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	C11orf70	Q9BRQ4	267 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	SPON2	Q9BUD6	331 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	ZYG11B	Q9C0D3	744 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	NEUROG2	Q9H2A3	272 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	MTG2	Q9H4K7	406 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	GAREM1	Q9H706	876 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	OSGEP	Q9NPF4	335 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	FSCN3	Q9NQT6	498 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	DONSON	Q9NYP3	566 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	SCHIP1	Q9P0W5	487 aa	Predicted RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	OR12D3	Q9UGF7	316 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	TMEM59L	Q9UK28	342 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	NOCT	Q9UK39	431 aa	Known RBP	7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	ITIH6	Q6UXX5	1313 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	MYOF	Q9NZM1	2061 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	EPG5	Q9HCE0	2579 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	CHD8	Q9HCK8	2581 aa		7.51	□□□□□ -1.21
SCFD1-222	ENST00000556768	FAM170A	A1A519	330 aa		7.5	□□□□□ -1.21
SCFD1-222	ENST00000556768	ILVBL	A1L0T0	632 aa		7.5	□□□□□ -1.21
SCFD1-222	ENST00000556768	DRGX	A6NNA5	263 aa		7.5	□□□□□ -1.21
SCFD1-222	ENST00000556768	CBX4	O00257	560 aa		7.5	□□□□□ -1.21
SCFD1-222	ENST00000556768	MCF2L	O15068	1137 aa		7.5	□□□□□ -1.21
SCFD1-222	ENST00000556768	ALOX15B	O15296	676 aa		7.5	□□□□□ -1.21
SCFD1-222	ENST00000556768	TNFAIP3	P21580	790 aa		7.5	□□□□□ -1.21
SCFD1-222	ENST00000556768	ADRA1B	P35368	520 aa		7.5	□□□□□ -1.21

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