RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 PTPRNQ16849 979 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 EGFLAMQ63HQ2 1017 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 NUDT18Q6ZVK8 323 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 ZC3H18Q86VM9 953 aaKnown RBP17.77■□□□□ 0.44
TUBB3-211ENST00000556536 CCNYQ8ND76 341 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 C1orf54Q8WWF1 131 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 ACDQ96AP0 544 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 RPL10LQ96L21 214 aaKnown RBP17.77■□□□□ 0.44
TUBB3-211ENST00000556536 C10orf88Q9H8K7 445 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 HPCAL4Q9UM19 191 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 ERVW-1Q9UQF0 538 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 STARD13Q9Y3M8 1113 aa17.77■□□□□ 0.44
TUBB3-211ENST00000556536 MYO15AQ9UKN7 3530 aa17.77■□□□□ 0.43
TUBB3-211ENST00000556536 FAM170BA6NMN3 283 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 K7ERQ8 282 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 PDE2AO00408 941 aaPredicted RBP17.76■□□□□ 0.43
TUBB3-211ENST00000556536 PEX11BO96011 259 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 PDGFBP01127 241 aaPredicted RBP17.76■□□□□ 0.43
TUBB3-211ENST00000556536 ASLP04424 464 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 ATP5BP06576 529 aaKnown RBP17.76■□□□□ 0.43
TUBB3-211ENST00000556536 DLDP09622 509 aaKnown RBP17.76■□□□□ 0.43
TUBB3-211ENST00000556536 CHRNB1P11230 501 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 KIR2DL1P43626 348 aaPredicted RBP17.76■□□□□ 0.43
TUBB3-211ENST00000556536 EIF3EP60228 445 aaKnown RBP17.76■□□□□ 0.43
TUBB3-211ENST00000556536 SULT2A1Q06520 285 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 IL10RBQ08334 325 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 FAM182AQ5T1J6 154 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 BZW1Q7L1Q6 419 aaKnown RBP17.76■□□□□ 0.43
TUBB3-211ENST00000556536 LRRC49Q8IUZ0 686 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 ATOH1Q92858 354 aaPredicted RBP17.76■□□□□ 0.43
TUBB3-211ENST00000556536 HDAC11Q96DB2 347 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 MYO19Q96H55 970 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 TSGA13Q96PP4 275 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 ACOX2Q99424 681 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 AP1M1Q9BXS5 423 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 SP110Q9HB58 689 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 FAM86C1Q9NVL1 165 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 SLCO3A1Q9UIG8 710 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 MRPS17Q9Y2R5 130 aaKnown RBP17.76■□□□□ 0.43
TUBB3-211ENST00000556536 KIAA1549LQ6ZVL6 1849 aa17.76■□□□□ 0.43
TUBB3-211ENST00000556536 PPP1R12AO14974 1030 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-211ENST00000556536 NCAM2O15394 837 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 URI1O94763 535 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-211ENST00000556536 VAV1P15498 845 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 AVPR2P30518 371 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 TIE1P35590 1138 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 PPIDQ08752 370 aaKnown RBP17.75■□□□□ 0.43
TUBB3-211ENST00000556536 AP1B1Q10567 949 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 FZD5Q13467 585 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 ZNF234Q14588 700 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 PRKD1Q15139 912 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-211ENST00000556536 C2orf27AQ580R0 203 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 RETSATQ6NUM9 610 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 PRELID2Q8N945 189 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 TTC13Q8NBP0 860 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 SLC35B2Q8TB61 432 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 MAIP1Q8WWC4 291 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 QKIQ96PU8 341 aaKnown RBP eCLIP17.75■□□□□ 0.43
TUBB3-211ENST00000556536 LMAN1LQ9HAT1 526 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 THAP10Q9P2Z0 257 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-211ENST00000556536 SLC25A13Q9UJS0 675 aa17.75■□□□□ 0.43
TUBB3-211ENST00000556536 H7C0C1 242 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 STK25O00506 426 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 MCF2LO15068 1137 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 SMAD6O43541 496 aaKnown RBP17.74■□□□□ 0.43
TUBB3-211ENST00000556536 LIASO43766 372 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 RNF40O75150 1001 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 SRPRAP08240 638 aaKnown RBP17.74■□□□□ 0.43
TUBB3-211ENST00000556536 RBP3P10745 1247 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 SRCP12931 536 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 HNRNPLP14866 589 aaKnown RBP eCLIP17.74■□□□□ 0.43
TUBB3-211ENST00000556536 CCNCP24863 283 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 ATP5OP48047 213 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 SERPINH1P50454 418 aaKnown RBP17.74■□□□□ 0.43
TUBB3-211ENST00000556536 NUBP1P53384 320 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 XRCC4Q13426 336 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 SNX1Q13596 522 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 CYTH1Q15438 398 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 Q6ZS52 159 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 CCDC13Q8IYE1 715 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 ZNF513Q8N8E2 541 aaPredicted RBP17.74■□□□□ 0.43
TUBB3-211ENST00000556536 KIF18AQ8NI77 898 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 USP33Q8TEY7 942 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 UCMAQ8WVF2 138 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 TFB1MQ8WVM0 346 aaKnown RBP17.74■□□□□ 0.43
TUBB3-211ENST00000556536 NAP1L3Q99457 506 aaPredicted RBP17.74■□□□□ 0.43
TUBB3-211ENST00000556536 BRD8Q9H0E9 1235 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 CACNA2D2Q9NY47 1150 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 UBA2Q9UBT2 640 aaPredicted RBP17.74■□□□□ 0.43
TUBB3-211ENST00000556536 DNPEPQ9ULA0 475 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 PLA2G4CQ9UP65 541 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 HS3ST2Q9Y278 367 aa17.74■□□□□ 0.43
TUBB3-211ENST00000556536 ZFHX2Q9C0A1 2572 aaPredicted RBP17.73■□□□□ 0.43
TUBB3-211ENST00000556536 ZSCAN5CA6NGD5 496 aaPredicted RBP17.73■□□□□ 0.43
TUBB3-211ENST00000556536 TTC34A8MYJ7 566 aa17.73■□□□□ 0.43
TUBB3-211ENST00000556536 HACD1B0YJ81 288 aa17.73■□□□□ 0.43
TUBB3-211ENST00000556536 WASH3PC4AMC7 463 aa17.73■□□□□ 0.43
TUBB3-211ENST00000556536 KCNK1O00180 336 aa17.73■□□□□ 0.43
TUBB3-211ENST00000556536 KRIT1O00522 736 aa17.73■□□□□ 0.43
TUBB3-211ENST00000556536 MATN3O15232 486 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms