RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GALNSP34059 522 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 PHBP35232 272 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 RGS7P49802 495 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ADARP55265 1226 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 POLR2GP62487 172 aaKnown RBP eCLIP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 CDC16Q13042 620 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 GPS1Q13098 491 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 MPP2Q14168 576 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ARL13BQ3SXY8 428 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 SLC45A4Q5BKX6 768 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 SPDYAQ5MJ70 313 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 SNX30Q5VWJ9 437 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ANKRD22Q5VYY1 191 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 C6orf89Q6UWU4 347 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 C17orf99Q6UX52 265 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ISLR2Q6UXK2 745 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF704Q6ZNC4 412 aaPredicted RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 RFPL4BQ6ZWI9 263 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 GSTA5Q7RTV2 222 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 LRRC52Q8N7C0 313 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 LSMEM1Q8N8F7 131 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 SMG8Q8ND04 991 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 TTC8Q8TAM2 541 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 CLEC4CQ8WTT0 213 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 RNF139Q8WU17 664 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 RXFP2Q8WXD0 754 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 NMD3Q96D46 503 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 SERPINB12Q96P63 405 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 OLFM3Q96PB7 478 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 MNTQ99583 582 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 C11orf84Q9BUA3 381 aaPredicted RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 SHCBP1LQ9BZQ2 653 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 B3GNT4Q9C0J1 378 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 STMN4Q9H169 189 aaPredicted RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 GBA3Q9H227 469 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 CNOT10Q9H9A5 744 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 WASH6PQ9NQA3 447 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 COL4A4P53420 1690 aaPredicted RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 NLRC5Q86WI3 1866 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 TCRBV7S3A2A0A539 114 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 GMNCA6NCL1 334 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 APOC4-APOC2K7ER74 178 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 BANF1O75531 89 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 APOC2P02655 101 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 TFPTP0C1Z6 253 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 CHRNB1P11230 501 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 RPL9P32969 192 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 RPL34P49207 117 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 PSEN2P49810 448 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 HUNKP57058 714 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 DPYSL3Q14195 570 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 PCBP1Q15365 356 aaKnown RBP eCLIP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 MAPKAPK3Q16644 382 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 UGP2Q16851 508 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 MSS51Q4VC12 460 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ANKRD20A8PQ5CZ79 823 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ANKRD20A2Q5SQ80 823 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ANKRD20A3Q5VUR7 823 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 AADACL4Q5VUY2 407 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 METTL21CQ5VZV1 264 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 PDE12Q6L8Q7 609 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 UNC45BQ8IWX7 931 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 SCUBE3Q8IX30 993 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ST13P5Q8NFI4 369 aaPredicted RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 OR52K2Q8NGK3 314 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 URGCPQ8TCY9 931 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 CPT1BQ92523 772 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 RELTQ969Z4 430 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 XPO6Q96QU8 1125 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 CNPY3Q9BT09 278 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 NUSAP1Q9BXS6 441 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 PIDD1Q9HB75 910 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 NMRK2Q9NPI5 230 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 KLK14Q9P0G3 267 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 PIN4Q9Y237 131 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 CASP8AP2Q9UKL3 1982 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ATXN2Q99700 1313 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 OR6C65A6NJZ3 312 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 MEIS3P2A8K0S8 358 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 F5H423 210 aaPredicted RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 TMEM63AO94886 807 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ARHGEF15O94989 841 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 UPP2O95045 317 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ANP32DO95626 131 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 CPA3P15088 417 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 PDGFRAP16234 1089 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 PORP16435 677 aaPredicted RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 GPD1P21695 349 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 DRD4P21917 467 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 L1CAMP32004 1257 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 MAGEA4P43358 317 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ERFP50548 548 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 RPP30P78346 268 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 PURAQ00577 322 aaKnown RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 IFRD2Q12894 506 aaPredicted RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 CYLC2Q14093 348 aaPredicted RBP5.19□□□□□ -1.58
TMEM260-210ENST00000556422 MORF4L2Q15014 288 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms