RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ACSL1P33121 698 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 DPP6P42658 865 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 SLC20A2Q08357 652 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 AASDHQ4L235 1098 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-217ENST00000556203 PPP6R3Q5H9R7 873 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-217ENST00000556203 C22orf39Q6P5X5 142 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 RFX8Q6ZV50 586 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 USP30Q70CQ3 517 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 DSG4Q86SJ6 1040 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 ZNF354CQ86Y25 554 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 SYT12Q8IV01 421 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 CADM4Q8NFZ8 388 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 FOXJ1Q92949 421 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 BTBD1Q9H0C5 482 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 NOL6Q9H6R4 1146 aaKnown RBP15.52■□□□□ 0.08
ACTN1-217ENST00000556203 ZWILCHQ9H900 591 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 UVRAGQ9P2Y5 699 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 SERGEFQ9UGK8 458 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 PILRBQ9UKJ0 227 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 HPCAL4Q9UM19 191 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 FCF1Q9Y324 198 aaKnown RBP15.52■□□□□ 0.08
ACTN1-217ENST00000556203 GVINP1Q7Z2Y8 2422 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 MEI4A8MW99 385 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 PATE3B3GLJ2 98 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 KHNYNO15037 678 aaKnown RBP15.51■□□□□ 0.07
ACTN1-217ENST00000556203 MCF2LO15068 1137 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 DAPK3O43293 454 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 KDELR3O43731 214 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 FOXD2O60548 495 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-217ENST00000556203 RNASEH2AO75792 299 aaKnown RBP15.51■□□□□ 0.07
ACTN1-217ENST00000556203 SEMA4FO95754 770 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 CD160O95971 181 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 ADH1BP00325 375 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 GOT1P17174 413 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 SFSWAPQ12872 951 aaKnown RBP15.51■□□□□ 0.07
ACTN1-217ENST00000556203 BOLA3Q53S33 107 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 SYCP2LQ5T4T6 812 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 DCAF12L1Q5VU92 463 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 TXNRD3NBQ6F5E7 133 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 RGL4Q8IZJ4 473 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 HDDC3Q8N4P3 179 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 AADATQ8N5Z0 425 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 OR2A12Q8NGT7 310 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 HSPH1Q92598 858 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 HMCESQ96FZ2 354 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 CCDC114Q96M63 670 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 OMDQ99983 421 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 CEP44Q9C0F1 390 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 NEUROG2Q9H2A3 272 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 TNKS2Q9H2K2 1166 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 SGK2Q9HBY8 427 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 PPM1HQ9ULR3 514 aa15.51■□□□□ 0.07
ACTN1-217ENST00000556203 FARP1Q9Y4F1 1045 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-217ENST00000556203 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 METTL12A8MUP2 240 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 PRR5-ARHGAP8B1AHC4 643 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 RASA4BC9J798 803 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 C1QTNF3-AMACRE9PGA6 284 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 ALOX15BO15296 676 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 RASA4O43374 803 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 GDF9O60383 454 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 ZNF821O75541 412 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 RARAP10276 462 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 MAOBP27338 520 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 CHRNA3P32297 505 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 HOXD12P35452 270 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 SSR1P43307 286 aaKnown RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 RECQLP46063 649 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 DNA2P51530 1060 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 METAP1P53582 386 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 GEMIN4P57678 1058 aaKnown RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 YBEYP58557 167 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 ARHGAP8P85298 464 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 SLC25A11Q02978 314 aaKnown RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 DPYSL2Q16555 572 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 POM121L1PQ3SYA9 428 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 PARP15Q460N3 678 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 TRIM61Q5EBN2 209 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 WDR45BQ5MNZ6 344 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 FAM46CQ5VWP2 391 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 PEAR1Q5VY43 1037 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 LEKR1Q6ZMV7 388 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 UMODL1-AS1Q8N2C9 162 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 PCDH20Q8N6Y1 951 aaKnown RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 PIP4K2CQ8TBX8 421 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 CELF6Q96J87 481 aaKnown RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 C6orf106Q9H6K1 298 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 OSGEPQ9NPF4 335 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 RXFP3Q9NSD7 469 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 DONSONQ9NYP3 566 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 CWC15Q9P013 229 aaKnown RBP15.5■□□□□ 0.07
ACTN1-217ENST00000556203 SARDHQ9UL12 918 aa15.5■□□□□ 0.07
ACTN1-217ENST00000556203 PLXND1Q9Y4D7 1925 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 CXorf51AA0A1B0GTR3 108 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 FAM47DPA6NHR8 397 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 H3BRJ5 948 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 PLK4O00444 970 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 BUB1O43683 1085 aa15.49■□□□□ 0.07
ACTN1-217ENST00000556203 PROSCO94903 275 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms