RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 ALDH1A3P47895 512 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 MAPKAPK2P49137 400 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 HARS2P49590 506 aaKnown RBP10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 MPP3Q13368 585 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 POLD3Q15054 466 aaPredicted RBP10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 TAF12Q16514 161 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 PARP15Q460N3 678 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 HECTD3Q5T447 861 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 MARC1Q5VT66 337 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 TRPM8Q7Z2W7 1104 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 CHSY1Q86X52 802 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 ZNF354CQ86Y25 554 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 CCDC117Q8IWD4 279 aaPredicted RBP10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 NDUFAF2Q8N183 169 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 ANKLE1Q8NAG6 615 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 IPMKQ8NFU5 416 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 ATP2A3Q93084 1043 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 IGSF8Q969P0 613 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 HMCESQ96FZ2 354 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 APOL2Q9BQE5 337 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 FSD1LQ9BXM9 530 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 SP110Q9HB58 689 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 CHRAC1Q9NRG0 131 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 PRKAG3Q9UGI9 489 aa10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 MRPL42Q9Y6G3 142 aaKnown RBP10.27□□□□□ -0.76
EFCAB11-209ENST00000556005 ZNF840PA6NDX5 716 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 F5H5T6 163 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 RAMP2O60895 175 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 TIMP1P01033 207 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 ITGA2BP08514 1039 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 LAG3P18627 525 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 TACR2P21452 398 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 SLC11A2P49281 568 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 YBEYP58557 167 aaPredicted RBP10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 PDE1BQ01064 536 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 BTG3Q14201 252 aaPredicted RBP10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 LACTB2Q53H82 288 aaPredicted RBP10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 PCID2Q5JVF3 399 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 POTEHQ6S545 545 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 TRIM42Q8IWZ5 723 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 SLC39A11Q8N1S5 342 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 CCDC63Q8NA47 563 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 SPOCK2Q92563 424 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 VWCEQ96DN2 955 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 MFSD3Q96ES6 412 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 MYRFLQ96LU7 910 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 KIFC1Q9BW19 673 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 SLC25A51Q9H1U9 297 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 C12orf65Q9H3J6 166 aaKnown RBP10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 C11orf49Q9H6J7 331 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 ACTR5Q9H9F9 607 aaPredicted RBP10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 CYP4F11Q9HBI6 524 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 WBP1LQ9NX94 342 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 TRPM5Q9NZQ8 1165 aa10.27□□□□□ -0.77
EFCAB11-209ENST00000556005 SHROOM3Q8TF72 1996 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 J3KR12 359 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 ACSL4O60488 711 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 SEC24AO95486 1093 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 PEX11BO96011 259 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 ELF1P32519 619 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 SPRP35270 261 aaPredicted RBP10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 ADRA1AP35348 466 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 GJA8P48165 433 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 PPP3CCP48454 512 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 SERPINB4P48594 390 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 KCNQ1P51787 676 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 VEPH1Q14D04 833 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 C5orf22Q49AR2 442 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 STXBP5Q5T5C0 1151 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 TEDDM1Q5T9Z0 273 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 FYB2Q5VWT5 728 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 ARMC3Q5W041 872 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 RNF43Q68DV7 783 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 CGB2Q6NT52 195 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 FAM117BQ6P1L5 589 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 CDHR3Q6ZTQ4 885 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 DDX53Q86TM3 631 aaKnown RBP10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 KCNMB4Q86W47 210 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 CMTR2Q8IYT2 770 aaKnown RBP10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 GBP7Q8N8V2 638 aaPredicted RBP10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 PTCD2Q8WV60 388 aaKnown RBP10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 PABPC5Q96DU9 382 aaKnown RBP10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 ZNF419Q96HQ0 510 aaPredicted RBP10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 FICDQ9BVA6 458 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 HERC2P3Q9BVR0 1158 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 SLCO1B3Q9NPD5 702 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 VPS45Q9NRW7 570 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 C20orf96Q9NUD7 363 aaPredicted RBP10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 PCMTD2Q9NV79 361 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 NSMCE4AQ9NXX6 385 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 SPG21Q9NZD8 308 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 DCDC2Q9UHG0 476 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 GREB1Q4ZG55 1949 aa10.26□□□□□ -0.77
EFCAB11-209ENST00000556005 PMPCBO75439 489 aa10.25□□□□□ -0.77
EFCAB11-209ENST00000556005 ALDOAP04075 364 aaKnown RBP10.25□□□□□ -0.77
EFCAB11-209ENST00000556005 URODP06132 367 aa10.25□□□□□ -0.77
EFCAB11-209ENST00000556005 HMGA1P17096 107 aaKnown RBP10.25□□□□□ -0.77
EFCAB11-209ENST00000556005 MAGEA9P43362 315 aa10.25□□□□□ -0.77
EFCAB11-209ENST00000556005 TNK2Q07912 1038 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms