RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 GRAMD1AQ96CP6 724 aa9.39□□□□□ -0.91
PRKCH-218ENST00000555628 USP28Q96RU2 1077 aa9.39□□□□□ -0.91
PRKCH-218ENST00000555628 SEMA3CQ99985 751 aa9.39□□□□□ -0.91
PRKCH-218ENST00000555628 USP29Q9HBJ7 922 aa9.39□□□□□ -0.91
PRKCH-218ENST00000555628 ACSL6Q9UKU0 697 aa9.39□□□□□ -0.91
PRKCH-218ENST00000555628 ABCA12Q86UK0 2595 aa9.39□□□□□ -0.91
PRKCH-218ENST00000555628 PRAMEF26H0Y7S4 382 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 K7ESM1 405 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 XPO1O14980 1071 aaKnown RBP9.38□□□□□ -0.91
PRKCH-218ENST00000555628 SCAMP1O15126 338 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 FFAR2O15552 330 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 KLRC4O43908 158 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 MAGEC1O60732 1142 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 AFPP02771 609 aaKnown RBP9.38□□□□□ -0.91
PRKCH-218ENST00000555628 ITGB2P05107 769 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 GP1BBP13224 206 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 CD58P19256 250 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 MAT2AP31153 395 aaKnown RBP9.38□□□□□ -0.91
PRKCH-218ENST00000555628 STK19P49842 368 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-218ENST00000555628 EPHA4P54764 986 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 DAB2P98082 770 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 ADIGQ0VDE8 80 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 SRSF6Q13247 344 aaKnown RBP9.38□□□□□ -0.91
PRKCH-218ENST00000555628 RABEP1Q15276 862 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 PIP5KL1Q5T9C9 394 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 ZNF385CQ66K41 422 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-218ENST00000555628 CCDC81Q6ZN84 652 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 ATG14Q6ZNE5 492 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 TMC6Q7Z403 805 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 ABI3BPQ7Z7G0 1075 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 APCDD1Q8J025 514 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 ZNF557Q8N988 423 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-218ENST00000555628 HJURPQ8NCD3 748 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-218ENST00000555628 OR13H1Q8NG92 308 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 GOLGA5Q8TBA6 731 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 IFT43Q96FT9 208 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 FCRL2Q96LA5 508 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-218ENST00000555628 NOX5Q96PH1 765 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 SLC39A2Q9NP94 309 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 SCHIP1Q9P0W5 487 aaPredicted RBP9.38□□□□□ -0.91
PRKCH-218ENST00000555628 PPM1HQ9ULR3 514 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 SMC3Q9UQE7 1217 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 ICE1Q9Y2F5 2266 aa9.38□□□□□ -0.91
PRKCH-218ENST00000555628 TBC1D3DA0A087WVF3 549 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 TBC1D3IA0A087WXS9 549 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 TBC1D3EA0A087X179 549 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 TBC1D3KA0A087X1G2 549 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 TBC1D3FA6NER0 549 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-218ENST00000555628 TBC1D3LB9A6J9 549 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 MAPK13O15264 365 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 ACSL4O60488 711 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 RNGTTO60942 597 aaKnown RBP9.37□□□□□ -0.91
PRKCH-218ENST00000555628 KIF20AO95235 890 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 FYNP06241 537 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 ITGA2BP08514 1039 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 TBC1D3HP0C7X1 549 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 THEGLP0DJG4 465 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 CR2P20023 1033 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 DUSP3P51452 185 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-218ENST00000555628 DAOAP59103 153 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 ST8SIA6P61647 398 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 ECT2LQ008S8 904 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 CNTN1Q12860 1018 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 STK4Q13043 487 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 ZNF284Q2VY69 593 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 ZNF394Q53GI3 561 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 MS4A13Q5J8X5 152 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 TBC1D3GQ6DHY5 549 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 TBC1D3CQ6IPX1 549 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 GUSBP11Q6P575 273 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 FOXR1Q6PIV2 292 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 SHC4Q6S5L8 630 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-218ENST00000555628 GCNT7Q6ZNI0 430 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 PRPF39Q86UA1 669 aaKnown RBP9.37□□□□□ -0.91
PRKCH-218ENST00000555628 TBC1D3Q8IZP1 549 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-218ENST00000555628 IFI44Q8TCB0 444 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 ZDHHC1Q8WTX9 485 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 SEMA4DQ92854 862 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 CCDC97Q96F63 343 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-218ENST00000555628 SLC39A13Q96H72 371 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 SPAG5Q96R06 1193 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 CCNL2Q96S94 520 aaPredicted RBP9.37□□□□□ -0.91
PRKCH-218ENST00000555628 LRRC27Q9C0I9 530 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 CISHQ9NSE2 258 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 CREBBPQ92793 2442 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 CELSR2Q9HCU4 2923 aa9.37□□□□□ -0.91
PRKCH-218ENST00000555628 CRYBG3Q68DQ2 2970 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 PVALEFA0A1B0GWK0 134 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 EME2A4GXA9 379 aaPredicted RBP9.36□□□□□ -0.91
PRKCH-218ENST00000555628 RNF103O00237 685 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 NEBLO76041 1014 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 LUC7L3O95232 432 aaKnown RBP9.36□□□□□ -0.91
PRKCH-218ENST00000555628 IL1BP01584 269 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 NR3C1P04150 777 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 FAM87AP0C7U9 286 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 TRIM49P0CI25 452 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 TRIM49CP0CI26 452 aa9.36□□□□□ -0.91
PRKCH-218ENST00000555628 PRLRP16471 622 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms