RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 DRD3P35462 400 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 AIF1P55008 147 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 C22orf39Q6P5X5 142 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 OR2A12Q8NGT7 310 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 C1orf216Q8TAB5 229 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 OR8D1Q8WZ84 308 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 SNX19Q92543 992 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 TRIM11Q96F44 468 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 OMDQ99983 421 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 ACE2Q9BYF1 805 aaPredicted RBP20.97■□□□□ 0.95
VTI1B-205ENST00000555543 ARHGAP20Q9P2F6 1191 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 SUSD2Q9UGT4 822 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 SCINQ9Y6U3 715 aa20.97■□□□□ 0.95
VTI1B-205ENST00000555543 MED19A0JLT2 244 aaPredicted RBP20.96■□□□□ 0.95
VTI1B-205ENST00000555543 MCF2LO15068 1137 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 CREB3O43889 395 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 ZNF821O75541 412 aaPredicted RBP20.96■□□□□ 0.95
VTI1B-205ENST00000555543 CD160O95971 181 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 CTSLP07711 333 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 MYBL1P10243 752 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 EPHB2P29323 1055 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 GALCP54803 685 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 GFPT1Q06210 699 aaPredicted RBP20.96■□□□□ 0.95
VTI1B-205ENST00000555543 CA9Q16790 459 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 POM121L1PQ3SYA9 428 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 CYP4V2Q6ZWL3 525 aaPredicted RBP20.96■□□□□ 0.95
VTI1B-205ENST00000555543 HDDC3Q8N4P3 179 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 OR2I1PQ8NGU4 316 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 FNIP1Q8TF40 1166 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 ARHGEF2Q92974 986 aaKnown RBP20.96■□□□□ 0.95
VTI1B-205ENST00000555543 BIRC7Q96CA5 298 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 TNKS2Q9H2K2 1166 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 RETREG1Q9H6L5 497 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 NOL6Q9H6R4 1146 aaKnown RBP20.96■□□□□ 0.95
VTI1B-205ENST00000555543 PCSK1NQ9UHG2 260 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 PPM1HQ9ULR3 514 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 FZD4Q9ULV1 537 aa20.96■□□□□ 0.95
VTI1B-205ENST00000555543 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.96■□□□□ 0.955e-7■■□□□ 12.2
VTI1B-205ENST00000555543 CNOT1A5YKK6 2376 aaKnown RBP20.96■□□□□ 0.95
VTI1B-205ENST00000555543 FAM47DPA6NHR8 397 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 C10orf142B7Z368 130 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 RNF103O00237 685 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 ALOX15BO15296 676 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 CBFA2T2O43439 604 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 FSBPO95073 299 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 IGHV4-34P06331 123 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 GOT1P17174 413 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 DESP17661 470 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 HNRNPH3P31942 346 aaKnown RBP20.95■□□□□ 0.94
VTI1B-205ENST00000555543 SERPINH1P50454 418 aaKnown RBP20.95■□□□□ 0.94
VTI1B-205ENST00000555543 CLCN6P51797 869 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 ADPRHP54922 357 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 DAB2IPQ5VWQ8 1189 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 SPECC1LQ69YQ0 1117 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 NCEH1Q6PIU2 408 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 DSG4Q86SJ6 1040 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 VPS36Q86VN1 386 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 RTL3Q8N8U3 475 aaKnown RBP20.95■□□□□ 0.94
VTI1B-205ENST00000555543 CHST14Q8NCH0 376 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 PIP4K2CQ8TBX8 421 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 FAM131CQ96AQ9 280 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 ORAI3Q9BRQ5 295 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 SNRNP25Q9BV90 132 aaKnown RBP20.95■□□□□ 0.94
VTI1B-205ENST00000555543 GTPBP2Q9BX10 602 aaKnown RBP20.95■□□□□ 0.94
VTI1B-205ENST00000555543 THAP2Q9H0W7 228 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 NENFQ9UMX5 172 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 AP4E1Q9UPM8 1137 aa20.95■□□□□ 0.94
VTI1B-205ENST00000555543 A0A1B0GTW7 788 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 ARHGAP33O14559 1287 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 BCAT2O15382 392 aaPredicted RBP20.94■□□□□ 0.94
VTI1B-205ENST00000555543 RAMP2O60895 175 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 LRCH4O75427 683 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 GNSP15586 552 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 MIPP30301 263 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 KIAA0895LQ68EN5 471 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 RETSATQ6NUM9 610 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 VSTM4Q8IW00 320 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 EPAS1Q99814 870 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 MAGEH1Q9H213 219 aa20.94■□□□□ 0.94
VTI1B-205ENST00000555543 FCF1Q9Y324 198 aaKnown RBP20.94■□□□□ 0.94
VTI1B-205ENST00000555543 CHRNA3P32297 505 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 ETFBP38117 255 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 BNC1Q01954 994 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 CNTN1Q12860 1018 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 SFSWAPQ12872 951 aaKnown RBP20.93■□□□□ 0.94
VTI1B-205ENST00000555543 GRIK2Q13002 908 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 UAP1L1Q3KQV9 507 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 PPM1JQ5JR12 505 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 ALKBH5Q6P6C2 394 aaKnown RBP20.93■□□□□ 0.94
VTI1B-205ENST00000555543 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.93■□□□□ 0.94
VTI1B-205ENST00000555543 LEKR1Q6ZMV7 388 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 DPY19L3Q6ZPD9 716 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 MINDY1Q8N5J2 469 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 OR2T34Q8NGX1 318 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 OR14C36Q8NHC7 312 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 ARHGEF26Q96DR7 871 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 KCTD15Q96SI1 283 aaPredicted RBP20.93■□□□□ 0.94
VTI1B-205ENST00000555543 DNAJC7Q99615 494 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 KLC2Q9H0B6 622 aa20.93■□□□□ 0.94
VTI1B-205ENST00000555543 DHX35Q9H5Z1 703 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms