RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 ATXN7L1Q9ULK2 861 aaPredicted RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 KIF26BQ2KJY2 2108 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 CCDC187A0A096LP49 1063 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 F5H5T6 163 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 K7ERQ8 282 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 M0QYV0 167 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 SPINT1O43278 529 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 AQP9O43315 295 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 GCATO75600 419 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 ENDOD1O94919 500 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 AFPP02771 609 aaKnown RBP8.59□□□□□ -1.03
NEK9-206ENST00000555537 CSF2P04141 144 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 JUNDP17535 347 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 WT1P19544 449 aaPredicted RBP8.59□□□□□ -1.03
NEK9-206ENST00000555537 BRD2P25440 801 aaKnown RBP8.59□□□□□ -1.03
NEK9-206ENST00000555537 CHRNA3P32297 505 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 PLK1P53350 603 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 CENPCQ03188 943 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 SULT2A1Q06520 285 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 C1QBPQ07021 282 aaKnown RBP8.59□□□□□ -1.03
NEK9-206ENST00000555537 SLC12A1Q13621 1099 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 NR0B2Q15466 257 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 IGFBP7Q16270 282 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 NFIL3Q16649 462 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 TBR1Q16650 682 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 ARSIQ5FYB1 569 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 CXorf57Q6NSI4 855 aaKnown RBP8.59□□□□□ -1.03
NEK9-206ENST00000555537 TMEM270Q6UE05 265 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 B3GNT8Q7Z7M8 397 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 VASH2Q86V25 355 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 RBFAQ8N0V3 343 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 FBXO39Q8N4B4 442 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 SH2D3CQ8N5H7 860 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 UBR7Q8N806 425 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 CHST14Q8NCH0 376 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 ERCC4Q92889 916 aaPredicted RBP8.59□□□□□ -1.03
NEK9-206ENST00000555537 FAM149B1Q96BN6 582 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 GRAMD1AQ96CP6 724 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 FAXDC2Q96IV6 333 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 PPP1R13BQ96KQ4 1090 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 SERPINB11Q96P15 392 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 IL12RB2Q99665 862 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 CCDC3Q9BQI4 270 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 FEM1AQ9BSK4 669 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 SLC17A9Q9BYT1 436 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 FOXP3Q9BZS1 431 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 EVA1BQ9NVM1 165 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 IPO11Q9UI26 975 aaKnown RBP8.59□□□□□ -1.03
NEK9-206ENST00000555537 SALL4Q9UJQ4 1053 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 SLC25A13Q9UJS0 675 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 HS3ST3A1Q9Y663 406 aa8.59□□□□□ -1.03
NEK9-206ENST00000555537 BOD1L1Q8NFC6 3051 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 PIEZO2Q9H5I5 2752 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 SYNJ2BP-COX16A0A087WUM0 186 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 SPTY2D1-AS1A0A0U1RR47 76 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 A0A1B0GVL5 298 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 A6NNZ2 444 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 KCNU1A8MYU2 1149 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 SMAD6O43541 496 aaKnown RBP8.58□□□□□ -1.04
NEK9-206ENST00000555537 SNAP91O60641 907 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 APOEP02649 317 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 NTRK1P04629 796 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 ITGA2BP08514 1039 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 SRCP12931 536 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 NME1P15531 152 aaKnown RBP8.58□□□□□ -1.04
NEK9-206ENST00000555537 RPL13P26373 211 aaKnown RBP8.58□□□□□ -1.04
NEK9-206ENST00000555537 GGCXP38435 758 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 ADKP55263 362 aaKnown RBP8.58□□□□□ -1.04
NEK9-206ENST00000555537 EIF2B5Q13144 721 aaKnown RBP8.58□□□□□ -1.04
NEK9-206ENST00000555537 PDE1CQ14123 709 aaPredicted RBP8.58□□□□□ -1.04
NEK9-206ENST00000555537 SPIDRQ14159 915 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 CLCA4Q14CN2 919 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 TAF5Q15542 800 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 TCEA2Q15560 299 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 CNGA2Q16280 664 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 SKIDA1Q1XH10 827 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 TCERG1LQ5VWI1 586 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 HIST2H2BCQ6DN03 193 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 FBXL22Q6P050 247 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 NEK5Q6P3R8 708 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 LINGO4Q6UY18 593 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 RAB11FIP2Q7L804 512 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 C14orf80Q86SX3 495 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 SLC35F3Q8IY50 421 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 OR2A12Q8NGT7 310 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 TPCN2Q8NHX9 752 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 KAT5Q92993 513 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 IFT43Q96FT9 208 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 BTN2A3PQ96KV6 586 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 HSFY1Q96LI6 401 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 PRMT1Q99873 361 aaKnown RBP8.58□□□□□ -1.04
NEK9-206ENST00000555537 TNKS2Q9H2K2 1166 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 EPB41L5Q9HCM4 733 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 ST7Q9NRC1 585 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 COX16Q9P0S2 106 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 RABGEF1Q9UJ41 708 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 KIAA1257Q9ULG3 409 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 PNMA8BQ9ULN7 279 aaPredicted RBP8.58□□□□□ -1.04
NEK9-206ENST00000555537 PCDHB4Q9Y5E5 795 aa8.58□□□□□ -1.04
NEK9-206ENST00000555537 OR51B4Q9Y5P0 310 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms