RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 EPHA8P29322 1005 aaPredicted RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 PROK1P58294 105 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 UFM1P61960 85 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 DCAF7P61962 342 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 KRT32Q14532 448 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 PGM5Q15124 567 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 TTLL5Q6EMB2 1281 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 ISM2Q6H9L7 571 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 MZT2BQ6NZ67 158 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 ZNF782Q6ZMW2 699 aaPredicted RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 TMTC3Q6ZXV5 915 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 FAM57BQ71RH2 274 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 ADGRG3Q86Y34 549 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 DIS3L2Q8IYB7 885 aaKnown RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 ADGRF4Q8IZF3 695 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 CPXM2Q8N436 756 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 TMEM217Q8N7C4 229 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 DNAAF1Q8NEP3 725 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 SAAL1Q96ER3 474 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 MPHOSPH8Q99549 860 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 FRMD8Q9BZ67 464 aaPredicted RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 SEMA4CQ9C0C4 833 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 PAPOLBQ9NRJ5 636 aaKnown RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 TBC1D22BQ9NU19 505 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 BLOC1S4Q9NUP1 217 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 GRHL1Q9NZI5 618 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 MPP6Q9NZW5 540 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 FBXO2Q9UK22 296 aaPredicted RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 FBXO9Q9UK97 447 aaPredicted RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 SARDHQ9UL12 918 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 ICKQ9UPZ9 632 aa5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 LAS1LQ9Y4W2 734 aaKnown RBP5.82□□□□□ -1.48
CKS1BP1-201ENST00000555221 PGPEP1LA6NFU8 196 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 F8W810 466 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 LATS1O95835 1130 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 SERPINC1P01008 464 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 PSMA4P25789 261 aaKnown RBP5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 ABCD1P33897 745 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 BLKP51451 505 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 NAP1L1P55209 391 aaKnown RBP5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 EFNB1P98172 346 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 GHRHRQ02643 423 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 CFHR1Q03591 330 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 RPE65Q16518 533 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 UBAP2Q5T6F2 1119 aaKnown RBP5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 HAUS3Q68CZ6 603 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 C17orf99Q6UX52 265 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 IL20RBQ6UXL0 311 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 HDAC7Q8WUI4 952 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 FAR1Q8WVX9 515 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 PIMREGQ9BSJ6 248 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 ACTR5Q9H9F9 607 aaPredicted RBP5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 TERF2IPQ9NYB0 399 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 PEMTQ9UBM1 199 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 SWAP70Q9UH65 585 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 COX11Q9Y6N1 276 aa5.81□□□□□ -1.48
CKS1BP1-201ENST00000555221 KDM3AQ9Y4C1 1321 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 TEX13CA0A0J9YWL9 993 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 RHODO00212 210 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 TNFSF14O43557 240 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 NEURL1O76050 574 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 ADAP00813 363 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 IL1AP01583 271 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 UBL4AP11441 157 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 KLRC2P26717 231 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 CIITAP33076 1130 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 PTPN9P43378 593 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 CPA2P48052 419 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 EIF3BP55884 814 aaKnown RBP5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 RPS13P62277 151 aaKnown RBP5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 PMPCAQ10713 525 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 ALG10Q5BKT4 473 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 ALG10BQ5I7T1 473 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 TTC39AQ5SRH9 613 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 TMEM81Q6P7N7 255 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 ZNF66Q6ZN08 573 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 CPLX4Q7Z7G2 160 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 WDR5BQ86VZ2 330 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 CCDC25Q86WR0 208 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 C11orf65Q8NCR3 313 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 METTL6Q8TCB7 284 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 KAT2AQ92830 837 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 KLHL29Q96CT2 875 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 SORCS2Q96PQ0 1159 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 NR1H4Q96RI1 486 aaPredicted RBP5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 HIPK3Q9H422 1215 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 SLC32A1Q9H598 525 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 KRT84Q9NSB2 600 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 ATP8A2Q9NTI2 1148 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 ZDHHC7Q9NXF8 308 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 FLRT1Q9NZU1 646 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 TBC1D14Q9P2M4 693 aa5.8□□□□□ -1.48
CKS1BP1-201ENST00000555221 COL11A2P13942 1736 aaPredicted RBP5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 NISCHQ9Y2I1 1504 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 ARHGAP10A1A4S6 786 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 PPP6CO00743 305 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 PRPF4O43172 522 aaKnown RBP eCLIP5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 AKAP8O43823 692 aaKnown RBP5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 UGDHO60701 494 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 USO1O60763 962 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms