RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 BPTFQ12830 3046 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 NCOR1O75376 2440 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 SLC9A3R1O14745 358 aaPredicted RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 ZMPSTE24O75844 475 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 CD72P21854 359 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 PTPN3P26045 913 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 ADCY8P40145 1251 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 MAPKAPK2P49137 400 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 STK19P49842 368 aaPredicted RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 ARF5P84085 180 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 GAD2Q05329 585 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 SERINC3Q13530 473 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 CDH18Q13634 790 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 ACBD5Q5T8D3 534 aaPredicted RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 ZDHHC24Q6UX98 284 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 ADIPOR2Q86V24 386 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 LZTR1Q8N653 840 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 SEC14L1Q92503 715 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 ATP2A3Q93084 1043 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 OTUB2Q96DC9 234 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 ERLEC1Q96DZ1 483 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 RPL10LQ96L21 214 aaKnown RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 PWWP2AQ96N64 755 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 PRDM16Q9HAZ2 1276 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 PCDH9Q9HC56 1237 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 DNAJC17Q9NVM6 304 aaKnown RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 THG1LQ9NWX6 298 aaKnown RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 IPO11Q9UI26 975 aaKnown RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 FBXO10Q9UK96 956 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 MYLKQ15746 1914 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 TCRBV7S3A2A0A539 114 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 HACD1B0YJ81 288 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 HOXC11O43248 304 aaPredicted RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 SMAD6O43541 496 aaKnown RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 CACNG3O60359 315 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 METTL18O95568 372 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 MX2P20592 715 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 NDST2P52849 883 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 MTM1Q13496 603 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 PDGFRLQ15198 375 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 MPP7Q5T2T1 576 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 EMC10Q5UCC4 262 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 ANKRD22Q5VYY1 191 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 FBXO38Q6PIJ6 1188 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 BZW1Q7L1Q6 419 aaKnown RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 CCDC13Q8IYE1 715 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 ZNF567Q8N184 647 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 CYB5D2Q8WUJ1 264 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 RTP4Q96DX8 246 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 AGAP3Q96P47 875 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 ACE2Q9BYF1 805 aaPredicted RBP10.99□□□□□ -0.65
TDP1-211ENST00000555178 RAB17Q9H0T7 212 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 MUC3BQ9H195 1237 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 MTG2Q9H4K7 406 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 PDFQ9HBH1 243 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 RAB21Q9UL25 225 aa10.99□□□□□ -0.65
TDP1-211ENST00000555178 ILVBLA1L0T0 632 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 CBX4O00257 560 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 MUSKO15146 869 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 SEC31AO94979 1220 aaKnown RBP10.98□□□□□ -0.65
TDP1-211ENST00000555178 NFATC1O95644 943 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 JCHAINP01591 159 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 CYBBP04839 570 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 FAM153BP0C7A2 387 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 ETFBP38117 255 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 PLTPP55058 493 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 LMNB2Q03252 620 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 SLC10A7Q0GE19 358 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 HLTFQ14527 1009 aaKnown RBP eCLIP10.98□□□□□ -0.65
TDP1-211ENST00000555178 FAM153CQ494X1 144 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 PITRM1Q5JRX3 1037 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 ANKRD20A2Q5SQ80 823 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 ANKRD20A1Q5TYW2 823 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 ANKRD20A3Q5VUR7 823 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 IZUMO3Q5VZ72 239 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 IL31Q6EBC2 164 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 WDR93Q6P2C0 686 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 RNF135Q8IUD6 432 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 PGBD5Q8N414 524 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 CNTD1Q8N815 330 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 FBXO25Q8TCJ0 367 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 E2F7Q96AV8 911 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 GORASP1Q9BQQ3 440 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 ATP13A1Q9HD20 1204 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 FAM153AQ9UHL3 310 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 FEZ2Q9UHY8 353 aaPredicted RBP10.98□□□□□ -0.65
TDP1-211ENST00000555178 VPS51Q9UID3 782 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 GGA2Q9UJY4 613 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 TTLL3Q9Y4R7 772 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 RAD54BQ9Y620 910 aa10.98□□□□□ -0.65
TDP1-211ENST00000555178 TYW5A2RUC4 315 aaKnown RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 NCAM2O15394 837 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 STIP1P31948 543 aaKnown RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 CD68P34810 354 aaPredicted RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 RGRP47804 291 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 ITGA8P53708 1063 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 BASP1P80723 227 aaKnown RBP10.97□□□□□ -0.65
TDP1-211ENST00000555178 PLEKHG6Q3KR16 790 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 ITPRIPL2Q3MIP1 535 aa10.97□□□□□ -0.65
TDP1-211ENST00000555178 PARP15Q460N3 678 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms