RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 WDR4P57081 412 aaKnown RBP17.78■□□□□ 0.44
SHOX-204ENST00000554971 GPX6P59796 221 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 BNIP1Q12981 228 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 RIPK1Q13546 671 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 PDK4Q16654 411 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 SPRED3Q2MJR0 410 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 MTSS1LQ765P7 747 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 CELF5Q8N6W0 485 aaKnown RBP17.78■□□□□ 0.44
SHOX-204ENST00000554971 RNF139Q8WU17 664 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 RTP4Q96DX8 246 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 ASIC4Q96FT7 647 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 OLA1Q9NTK5 396 aaKnown RBP17.78■□□□□ 0.44
SHOX-204ENST00000554971 PCSK1NQ9UHG2 260 aa17.78■□□□□ 0.44
SHOX-204ENST00000554971 DMDP11532 3685 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 COL4A3Q01955 1670 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 CHADO15335 359 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 TCF3P15923 654 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 NOS2P35228 1153 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 DYNLT1P63172 113 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 FCHO2Q0JRZ9 810 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 FASTKD3Q14CZ7 662 aaKnown RBP17.77■□□□□ 0.44
SHOX-204ENST00000554971 RAB6CQ53S08 254 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 BNIPLQ7Z465 357 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 MFSD6LQ8IWD5 586 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 PALM2Q8IXS6 379 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 CCDC63Q8NA47 563 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 TTC16Q8NEE8 873 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 GDAP1Q8TB36 358 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 RXFP2Q8WXD0 754 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 NPY6RQ99463 290 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 RAB6CQ9H0N0 254 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 PAK5Q9P286 719 aa17.77■□□□□ 0.44
SHOX-204ENST00000554971 ZDBF2Q9HCK1 2354 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 TYROBPO43914 113 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 ATP5HO75947 161 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 STC2O76061 302 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 SLC34A2O95436 690 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 KLKB1P03952 638 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 IRF1P10914 325 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 MNAT1P51948 309 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 GRM2Q14416 872 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 SNCBQ16143 134 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 SPDYAQ5MJ70 313 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 SH3PXD2AQ5TCZ1 1133 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 C3orf62Q6ZUJ4 267 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 GJD3Q8N144 294 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 SLC44A3Q8N4M1 653 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 ZFYVE19Q96K21 471 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 RNF157Q96PX1 679 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 CYTH2Q99418 400 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 CALN1Q9BXU9 219 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 PRDM16Q9HAZ2 1276 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 OBP2AQ9NY56 170 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.76■□□□□ 0.43
SHOX-204ENST00000554971 CFAP97Q9P2B7 532 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 SLC12A8A0AV02 714 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 TM9SF1O15321 606 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 IRAK2O43187 625 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 IGLV3-27P01718 113 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 ATXN1P54253 815 aaKnown RBP17.76■□□□□ 0.43
SHOX-204ENST00000554971 GDF10P55107 478 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 CDH6P55285 790 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 DARS2Q6PI48 645 aaKnown RBP17.76■□□□□ 0.43
SHOX-204ENST00000554971 UNC45BQ8IWX7 931 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 HSPH1Q92598 858 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 SLC39A13Q96H72 371 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 TRIM62Q9BVG3 475 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 KIF9Q9HAQ2 790 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 IGSF9Q9P2J2 1179 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 XPO7Q9UIA9 1087 aaKnown RBP17.76■□□□□ 0.43
SHOX-204ENST00000554971 TECTAO75443 2155 aa17.76■□□□□ 0.43
SHOX-204ENST00000554971 ARNTLO00327 626 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 NARSO43776 548 aaKnown RBP17.75■□□□□ 0.43
SHOX-204ENST00000554971 FAM155BO75949 473 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 HMBSP08397 361 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 GSTA2P09210 222 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 CD48P09326 243 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 PSMC3P17980 439 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 MSH2P43246 934 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 C15orf59Q2T9L4 293 aaPredicted RBP17.75■□□□□ 0.43
SHOX-204ENST00000554971 SLC25A52Q3SY17 297 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 CCDC14Q49A88 953 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 RNF135Q8IUD6 432 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 FAM71DQ8N9W8 422 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 BPIFB1Q8TDL5 484 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.75■□□□□ 0.43
SHOX-204ENST00000554971 PIGVQ9NUD9 493 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 ABCF3Q9NUQ8 709 aa17.75■□□□□ 0.43
SHOX-204ENST00000554971 SAE1Q9UBE0 346 aaPredicted RBP17.75■□□□□ 0.43
SHOX-204ENST00000554971 BCLAF3A2AJT9 711 aaKnown RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 I6L893 689 aaPredicted RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 ZFXP17010 805 aaPredicted RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 CA4P22748 312 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 ALDH3A1P30838 453 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 FOXN2P32314 431 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 SLC8A1P32418 973 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 MAGEA6P43360 314 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 COG7P83436 770 aa17.74■□□□□ 0.43
SHOX-204ENST00000554971 TRIP4Q15650 581 aaPredicted RBP17.74■□□□□ 0.43
SHOX-204ENST00000554971 FNBP1LQ5T0N5 605 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms