RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 K7ERQ8 282 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 MYO1FO00160 1098 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 MID1O15344 667 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 DAPK3O43293 454 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 BNIP3LO60238 219 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 GDF9O60383 454 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 RNASEH2AO75792 299 aaKnown RBP13.53□□□□□ -0.24
APEX1-208ENST00000554813 ZMPSTE24O75844 475 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 SEMA4FO95754 770 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 CFIP05156 583 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 GOT1P17174 413 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 ACVRL1P37023 503 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 PSMD8P48556 350 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 ZNF135P52742 658 aaPredicted RBP13.53□□□□□ -0.24
APEX1-208ENST00000554813 YBEYP58557 167 aaPredicted RBP13.53□□□□□ -0.24
APEX1-208ENST00000554813 TPI1P60174 286 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 IRX4P78413 519 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 SEMA3BQ13214 749 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
APEX1-208ENST00000554813 BOLA3Q53S33 107 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 TRIM61Q5EBN2 209 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 PEAR1Q5VY43 1037 aaPredicted RBP13.53□□□□□ -0.24
APEX1-208ENST00000554813 TCEAL6Q6IPX3 200 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 SLC23A3Q6PIS1 610 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 Q6ZVU0 165 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 DNASE2BQ8WZ79 361 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 ARHGEF2Q92974 986 aaKnown RBP13.53□□□□□ -0.24
APEX1-208ENST00000554813 TCEAL3Q969E4 200 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 RMDN1Q96DB5 314 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 CCDC42Q96M95 316 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 CEP44Q9C0F1 390 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 NEUROG2Q9H2A3 272 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 NDFIP2Q9NV92 336 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 DLL3Q9NYJ7 618 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 PPM1HQ9ULR3 514 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 FZD4Q9ULV1 537 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 SLC6A14Q9UN76 642 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 NEU3Q9UQ49 428 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 DMXL1Q9Y485 3027 aa13.53□□□□□ -0.24
APEX1-208ENST00000554813 A0A1W2PP55 124 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 LRRC72A6NJI9 287 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 WASH4PA8MWX3 477 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 PATE3B3GLJ2 98 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 C1QTNF3-AMACRE9PGA6 284 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 EEF2KO00418 725 aaKnown RBP13.52□□□□□ -0.25
APEX1-208ENST00000554813 KDELR3O43731 214 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 LRCH4O75427 683 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 SERPINF2P08697 491 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 H2AFZP0C0S5 128 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 GLDCP23378 1020 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 SERPINH1P50454 418 aaKnown RBP13.52□□□□□ -0.25
APEX1-208ENST00000554813 LIMK1P53667 647 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 TBX2Q13207 712 aaPredicted RBP13.52□□□□□ -0.25
APEX1-208ENST00000554813 ASTE1Q2TB18 679 aaPredicted RBP13.52□□□□□ -0.25
APEX1-208ENST00000554813 DCAF12L1Q5VU92 463 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 H2AFVQ71UI9 128 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 ZNF354CQ86Y25 554 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 UMODL1-AS1Q8N2C9 162 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 HDDC3Q8N4P3 179 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 OR2A12Q8NGT7 310 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 CTNNBL1Q8WYA6 563 aaPredicted RBP13.52□□□□□ -0.25
APEX1-208ENST00000554813 RTKNQ9BST9 563 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 SNRNP25Q9BV90 132 aaKnown RBP13.52□□□□□ -0.25
APEX1-208ENST00000554813 RBSNQ9H1K0 784 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 GPATCH2LQ9NWQ4 482 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 LCMT1Q9UIC8 334 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 ANAPC7Q9UJX3 599 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 NENFQ9UMX5 172 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 CEP192Q8TEP8 1941 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 NUP205Q92621 2012 aa13.52□□□□□ -0.25
APEX1-208ENST00000554813 ATXN2Q99700 1313 aaKnown RBP13.51□□□□□ -0.25
APEX1-208ENST00000554813 ZSCAN5CA6NGD5 496 aaPredicted RBP13.51□□□□□ -0.25
APEX1-208ENST00000554813 SLC30A4O14863 429 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 SMAD6O43541 496 aaKnown RBP13.51□□□□□ -0.25
APEX1-208ENST00000554813 PRNPP04156 253 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 MAOBP27338 520 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 CHRNA3P32297 505 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 HCAR3P49019 387 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 DNA2P51530 1060 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 ARF5P84085 180 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 CCDC15Q0P6D6 951 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 CA9Q16790 459 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 PARP15Q460N3 678 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 PPP6R3Q5H9R7 873 aaPredicted RBP13.51□□□□□ -0.25
APEX1-208ENST00000554813 STPG1Q5TH74 334 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 C22orf39Q6P5X5 142 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.51□□□□□ -0.25
APEX1-208ENST00000554813 AADATQ8N5Z0 425 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 PCDH20Q8N6Y1 951 aaKnown RBP13.51□□□□□ -0.25
APEX1-208ENST00000554813 NIPA2Q8N8Q9 360 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 TMIEQ8NEW7 156 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 PIP4K2CQ8TBX8 421 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 ISG20Q96AZ6 181 aaKnown RBP13.51□□□□□ -0.25
APEX1-208ENST00000554813 ARHGEF26Q96DR7 871 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 PEBP4Q96S96 227 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 CHP1Q99653 195 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 EDEM2Q9BV94 578 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 MIR1-1HGQ9H1L0 117 aa13.51□□□□□ -0.25
APEX1-208ENST00000554813 C6orf106Q9H6K1 298 aaPredicted RBP13.51□□□□□ -0.25
APEX1-208ENST00000554813 ZWILCHQ9H900 591 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms