RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 GBP6Q6ZN66 633 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 SLC26A9Q7LBE3 791 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 C14orf80Q86SX3 495 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 HORMAD1Q86X24 394 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 SLC25A45Q8N413 288 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 ATP11CQ8NB49 1132 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 C1orf131Q8NDD1 294 aaKnown RBP12.79□□□□□ -0.36
RDH11-207ENST00000554731 TMIEQ8NEW7 156 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 OR4C6Q8NH72 309 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 SLC39A7Q92504 469 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 SHC3Q92529 594 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 KLK6Q92876 244 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 FCRL3Q96P31 734 aaPredicted RBP12.79□□□□□ -0.36
RDH11-207ENST00000554731 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 DYRK4Q9NR20 520 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 APEX2Q9UBZ4 518 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 PCDHGC3Q9UN70 934 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 RAI2Q9Y5P3 530 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 MYLKQ15746 1914 aa12.79□□□□□ -0.36
RDH11-207ENST00000554731 HELZ2Q9BYK8 2649 aaKnown RBP12.79□□□□□ -0.36
RDH11-207ENST00000554731 SHROOM3Q8TF72 1996 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 ATXN7O15265 892 aaPredicted RBP12.78□□□□□ -0.36
RDH11-207ENST00000554731 FFAR2O15552 330 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 SNAP91O60641 907 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 CNTN5O94779 1100 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 MT-CO1P00395 513 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 MT-CO3P00414 261 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 PRNPP04156 253 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 PRB1P04280 392 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 ERBB2P04626 1255 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 RHOCP08134 193 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 SLC9A1P19634 815 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 HNRNPA2B1P22626 353 aaKnown RBP12.78□□□□□ -0.36
RDH11-207ENST00000554731 DGKAP23743 735 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 KRT9P35527 623 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 SLC6A3Q01959 620 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 PTK2Q05397 1052 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 EXOC3L4Q17RC7 722 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 ZNF284Q2VY69 593 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 KDM7AQ6ZMT4 941 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 CREBRFQ8IUR6 639 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 OR2A12Q8NGT7 310 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 ARRDC3Q96B67 414 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 PSMB7Q99436 277 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 CALN1Q9BXU9 219 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 FZD3Q9NPG1 666 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 UCKL1Q9NWZ5 548 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 RRN3Q9NYV6 651 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 VPS51Q9UID3 782 aa12.78□□□□□ -0.36
RDH11-207ENST00000554731 K7ERQ8 282 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 PCDH8O95206 1070 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 ADCY5O95622 1261 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 ALPPL2P10696 532 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 RRM1P23921 792 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 RECQLP46063 649 aaPredicted RBP12.77□□□□□ -0.37
RDH11-207ENST00000554731 CXCR3P49682 368 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 CLCN6P51797 869 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 APBA1Q02410 837 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 CCDC173Q0VFZ6 552 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 TBC1D25Q3MII6 688 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 PTPN20Q4JDL3 420 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 ALFQ53S48 1182 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 BRMS1LQ5PSV4 323 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 SMYD5Q6GMV2 418 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 LRRC31Q6UY01 552 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 ERN2Q76MJ5 926 aaKnown RBP12.77□□□□□ -0.37
RDH11-207ENST00000554731 SETD3Q86TU7 594 aaPredicted RBP12.77□□□□□ -0.37
RDH11-207ENST00000554731 DCAF4L2Q8NA75 395 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 LSM14AQ8ND56 463 aaKnown RBP12.77□□□□□ -0.37
RDH11-207ENST00000554731 ZNF397Q8NF99 534 aaPredicted RBP12.77□□□□□ -0.37
RDH11-207ENST00000554731 OR13H1Q8NG92 308 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 PPP1R16AQ96I34 528 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 TKTL2Q9H0I9 626 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 WDCPQ9H6R7 721 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 PIGVQ9NUD9 493 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 ARHGEF38Q9NXL2 777 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.77□□□□□ -0.37
RDH11-207ENST00000554731 STAP1Q9ULZ2 295 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 PAXBP1Q9Y5B6 917 aa12.77□□□□□ -0.37
RDH11-207ENST00000554731 TEX51A0A1B0GUA7 166 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 GTPBP10A4D1E9 387 aaKnown RBP12.76□□□□□ -0.37
RDH11-207ENST00000554731 SMAD6O43541 496 aaKnown RBP12.76□□□□□ -0.37
RDH11-207ENST00000554731 OPA1O60313 960 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 PIAS2O75928 621 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 CKMT1AP12532 417 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 PON1P27169 355 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 SULT1E1P49888 294 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 CLDN2P57739 230 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 RNASE9P60153 205 aaKnown RBP12.76□□□□□ -0.37
RDH11-207ENST00000554731 TLE3Q04726 772 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 BECN1Q14457 450 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 ARSIQ5FYB1 569 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 OTUD1Q5VV17 481 aaPredicted RBP12.76□□□□□ -0.37
RDH11-207ENST00000554731 C22orf39Q6P5X5 142 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 LINGO4Q6UY18 593 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 GPR155Q7Z3F1 870 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 TMC6Q7Z403 805 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 TFAP2DQ7Z6R9 452 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 ABI3BPQ7Z7G0 1075 aa12.76□□□□□ -0.37
RDH11-207ENST00000554731 ERICH1Q86X53 443 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms