RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 POLR2FP61218 127 aaKnown RBP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 MAPK8IP2Q13387 824 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 ELAVL3Q14576 367 aaKnown RBP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 SUZ12Q15022 739 aaKnown RBP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 SMAD1Q15797 465 aaKnown RBP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 COL28A1Q2UY09 1125 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 PTPN20Q4JDL3 420 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 CCDC157Q569K6 752 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 SFMBT2Q5VUG0 894 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 WDR59Q6PJI9 974 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 OLFML1Q6UWY5 402 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 SND1Q7KZF4 910 aaKnown RBP eCLIP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 ENOSF1Q7L5Y1 443 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 KANSL1Q7Z3B3 1105 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 C14orf80Q86SX3 495 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 SPATS2Q86XZ4 545 aaKnown RBP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 C1orf131Q8NDD1 294 aaKnown RBP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 OR14C36Q8NHC7 312 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 SAP25Q8TEE9 199 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 SPAG5Q96R06 1193 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 ELF4Q99607 663 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 TRIM62Q9BVG3 475 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 RRAGDQ9NQL2 400 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 ANLNQ9NQW6 1124 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 AASDHPPTQ9NRN7 309 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.87□□□□□ -0.67
SHMT2-215ENST00000554656 ARHGAP20Q9P2F6 1191 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 DKK4Q9UBT3 224 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 APEX2Q9UBZ4 518 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 FTSJ1Q9UET6 329 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 PCDHGC3Q9UN70 934 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 CEP83Q9Y592 693 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 BPTFQ12830 3046 aa10.87□□□□□ -0.67
SHMT2-215ENST00000554656 CHD5Q8TDI0 1954 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 TRABD2BA6NFA1 517 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 LRRC53A6NM62 1247 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 EIF3CLB5ME19 914 aaKnown RBP10.86□□□□□ -0.67
SHMT2-215ENST00000554656 RNF103O00237 685 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 ATP9BO43861 1147 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 HSF2BPO75031 334 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 DAB1O75553 588 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 GFPT2O94808 682 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 NDUFA10O95299 355 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 IL1BP01584 269 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 SERPING1P05155 500 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 GLI1P08151 1106 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 FERP16591 822 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 CCR1P32246 355 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 USP8P40818 1118 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 PRKCIP41743 596 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 JAM2P57087 298 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 NXPH1P58417 271 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 CYP4F3Q08477 520 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 DNAJC3Q13217 504 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 SLC12A1Q13621 1099 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 AUHQ13825 339 aaKnown RBP10.86□□□□□ -0.67
SHMT2-215ENST00000554656 POM121L1PQ3SYA9 428 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 TTC39BQ5VTQ0 682 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-215ENST00000554656 AGBL4Q5VU57 503 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 RNF219Q5W0B1 726 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-215ENST00000554656 RAD9BQ6WBX8 426 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 ZNF662Q6ZS27 426 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 Q6ZVU0 165 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 CCDC117Q8IWD4 279 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-215ENST00000554656 ZNF683Q8IZ20 524 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 TXLNBQ8N3L3 684 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 SERAC1Q96JX3 654 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 PPP1R13BQ96KQ4 1090 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 RPRD1AQ96P16 312 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-215ENST00000554656 PSMB7Q99436 277 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 EIF3CQ99613 913 aaKnown RBP10.86□□□□□ -0.67
SHMT2-215ENST00000554656 FEM1AQ9BSK4 669 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 STK33Q9BYT3 514 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 CAAP1Q9H8G2 361 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 ASNSD1Q9NWL6 643 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 VANGL2Q9ULK5 521 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 PPP2R2CQ9Y2T4 447 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 SNX10Q9Y5X0 201 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 ADGRG1Q9Y653 693 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 HS3ST4Q9Y661 456 aa10.86□□□□□ -0.67
SHMT2-215ENST00000554656 EPN1Q9Y6I3 576 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-215ENST00000554656 SMG1Q96Q15 3661 aaKnown RBP10.85□□□□□ -0.67
SHMT2-215ENST00000554656 SOWAHDA6NJG2 315 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 ENC1O14682 589 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 PLRG1O43660 514 aaKnown RBP10.85□□□□□ -0.67
SHMT2-215ENST00000554656 DFNA5O60443 496 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 CNTN5O94779 1100 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 IPO7O95373 1038 aaKnown RBP10.85□□□□□ -0.67
SHMT2-215ENST00000554656 LCA5LO95447 670 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 CTSLP07711 333 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 ABCB4P21439 1286 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 EPHA8P29322 1005 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-215ENST00000554656 MAT2AP31153 395 aaKnown RBP10.85□□□□□ -0.67
SHMT2-215ENST00000554656 STAT1P42224 750 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 ACADVLP49748 655 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 VASPP50552 380 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-215ENST00000554656 TAS2R38P59533 333 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 KRT83P78385 493 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 CNTN1Q12860 1018 aa10.85□□□□□ -0.67
SHMT2-215ENST00000554656 BNIP3Q12983 259 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms